Gene
RNA
| Item | Value |
|---|---|
| gene id | G1392048 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 56871102 ~ 56871326 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1589750 | True | 225 | lncRNA | 0.34 | 1 | 56871102 | 56871326 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492385 | LOC106566733 | coding | upstream | 40509 | 56825787 ~ 56830593 (+) |
| si:ch73-181d5.4 | LOC106566730 | coding | upstream | 50657 | 56790783 ~ 56820445 (+) |
| LOC118939462 | LOC106566730 | coding | upstream | 80173 | 56779988 ~ 56790929 (+) |
| LOC118939558 | NA | coding | upstream | 96024 | 56767646 ~ 56775078 (+) |
| LOC110492382 | LOC100195767 | coding | upstream | 108620 | 56729499 ~ 56762482 (+) |
| LOC110492387 | LOC106566767 | coding | downstream | 33617 | 56904943 ~ 56907957 (+) |
| LOC110492389 | cdh4 | coding | downstream | 374440 | 57245766 ~ 57788596 (+) |
| LOC110492393 | lsm14b | coding | downstream | 974684 | 57846010 ~ 57850014 (+) |
| LOC110492391 | ss18l1 | coding | downstream | 982575 | 57853901 ~ 57873777 (+) |
| LOC110492396 | y4629 | coding | downstream | 1005123 | 57876449 ~ 57887706 (+) |
| G1392046 | NA | non-coding | upstream | 780 | 56870118 ~ 56870322 (+) |
| G1392042 | NA | non-coding | upstream | 1775 | 56869050 ~ 56869327 (+) |
| G1391577 | NA | non-coding | upstream | 16638 | 56852758 ~ 56854464 (+) |
| G1391569 | NA | non-coding | upstream | 49556 | 56821237 ~ 56821546 (+) |
| G1392060 | NA | non-coding | downstream | 8488 | 56879814 ~ 56880058 (+) |
| G1392067 | NA | non-coding | downstream | 12021 | 56883347 ~ 56883568 (+) |
| G1392066 | NA | non-coding | downstream | 14417 | 56885743 ~ 56886406 (+) |
| G1392088 | NA | non-coding | downstream | 24969 | 56896295 ~ 56896543 (+) |
| G1391254 | NA | other | upstream | 624229 | 56246515 ~ 56247620 (+) |
| G1390616 | LOC106566696 | other | upstream | 1047910 | 55793024 ~ 55823192 (+) |
| G1390527 | NA | other | upstream | 1230803 | 55640022 ~ 55640299 (+) |
| G1390508 | NA | other | upstream | 1238264 | 55628694 ~ 55632838 (+) |
| G1392601 | NA | other | downstream | 494625 | 57365951 ~ 57366517 (+) |
| G1392616 | NA | other | downstream | 525614 | 57396940 ~ 57397177 (+) |
| G1392617 | NA | other | downstream | 530159 | 57401485 ~ 57402530 (+) |
| G1393570 | LOC106566761 | other | downstream | 1548060 | 58419386 ~ 58423502 (+) |
| G1393647 | LOC106613431 | other | downstream | 1694810 | 58566136 ~ 58566794 (+) |
