G1392050



Basic Information


Item Value
gene id G1392050
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 56871457 ~ 56871660 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1589752
ggtttgatttttctcagggtttcgcctgcaatatcagttcttttATACGCACAGACgctattttgacagttttggaaactttagagttttctatcctaatctgtcaagtatatgcatattctaacATCTGGttctgagaaataggccgtttactttgggaacgttatttttccaaacataaaaatagtgccccctagcttcaag

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1589752 True 204 lncRNA 0.37 1 56871457 56871660

Neighbor


gene id symbol gene type direction distance location
col9a3 LOC106566732 coding downstream 16938 56830760 ~ 56854519 (-)
LOC110492380 LOC106566729 coding downstream 142283 56713782 ~ 56729174 (-)
LOC110492379 LOC106566728 coding downstream 191557 56570125 ~ 56679900 (-)
LOC110492378 LOC106566727 coding downstream 307559 56543642 ~ 56563898 (-)
LOC110491119 LOC106566720 coding downstream 511489 56352467 ~ 56359968 (-)
LOC118939559 NA coding upstream 4638 56876298 ~ 56877789 (-)
LOC110492388 LOC106566734 coding upstream 43999 56915659 ~ 56937661 (-)
LOC110492390 taf4 coding upstream 961789 57833449 ~ 57845200 (-)
LOC110492394 psma7 coding upstream 978744 57849674 ~ 57853907 (-)
LOC110492397 NA coding upstream 1016049 57887491 ~ 57893319 (-)
G1392049 NA non-coding downstream 156 56871098 ~ 56871301 (-)
G1392043 NA non-coding downstream 2115 56868998 ~ 56869342 (-)
G1392017 NA non-coding downstream 45879 56825302 ~ 56825578 (-)
G1391985 NA non-coding downstream 96657 56774484 ~ 56774800 (-)
G1391983 NA non-coding downstream 97581 56773669 ~ 56773876 (-)
G1392052 NA non-coding upstream 2344 56874004 ~ 56874233 (-)
G1392059 NA non-coding upstream 7409 56879069 ~ 56879276 (-)
G1392062 NA non-coding upstream 8019 56879679 ~ 56879886 (-)
G1392064 NA non-coding upstream 9425 56881085 ~ 56881533 (-)
G1392065 NA non-coding upstream 10395 56882055 ~ 56882267 (-)
G1391869 NA other downstream 330528 56538592 ~ 56540929 (-)
G1391796 LOC100286403 other downstream 434178 56424272 ~ 56437279 (-)
LOC110492371 adcy6 other downstream 577985 56240763 ~ 56293503 (-)
G1391624 NA other downstream 645396 56225414 ~ 56226061 (-)
G1391586 NA other downstream 806595 56064503 ~ 56064862 (-)
G1393949 LOC105029132 other upstream 1333099 58204759 ~ 58207165 (-)
G1393997 LOC106566752 other upstream 1402368 58274028 ~ 58278427 (-)
LOC110492410 LOC106566756 other upstream 1430851 58302511 ~ 58315644 (-)

Expression



Co-expression Network