G1392069


Basic Information

Item Value
gene id G1392069
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 56882721 ~ 56883156 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1589771
acttcaagcctatcaactcccgagatgaggctagTGTAacctgtcgtggaaatttcctctatttaccaaatcatgagagcaaaccacaacacaagtcagagttagttatcaaagtccatctttaattatatgagctctatcacaaccctgtgactctcagatcaattcagtgtctatcaatgaattatCTGAGAGCCCCTTACACATTGCAGctgagatcctttaatagcaaaaaacacacatagtcagacagcatagacataataaatcgttcagctttgtctccttactcaaacccagaaccataaaccaatcctccatatcaacaggcatatatcaaatccatcctattgTGACAAGattacagagacacactgactggcacacagacattgtggagccaagagatacacgcttgacctctcccctctctccg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1589771 True 436 lncRNA 0.41 1 56882721 56883156

Neighbor

gene id symbol gene type direction distance location
LOC118939559 NA coding downstream 4932 56876298 ~ 56877789 (-)
LOC110491121 ogfr coding downstream 6801 56857071 ~ 56875920 (-)
col9a3 LOC106566732 coding downstream 28202 56830760 ~ 56854519 (-)
LOC110492380 LOC106566729 coding downstream 153547 56713782 ~ 56729174 (-)
LOC110492379 LOC106566728 coding downstream 202821 56570125 ~ 56679900 (-)
LOC110492388 LOC106566734 coding upstream 32503 56915659 ~ 56937661 (-)
LOC110492390 taf4 coding upstream 950293 57833449 ~ 57845200 (-)
LOC110492394 psma7 coding upstream 967248 57849674 ~ 57853907 (-)
LOC110492397 NA coding upstream 1004553 57887491 ~ 57893319 (-)
LOC110492399 cdh26 coding upstream 1015315 57898471 ~ 57921688 (-)
G1392068 NA non-coding downstream 83 56882310 ~ 56882638 (-)
G1392065 NA non-coding downstream 454 56882055 ~ 56882267 (-)
G1392064 NA non-coding downstream 1188 56881085 ~ 56881533 (-)
G1392062 NA non-coding downstream 2835 56879679 ~ 56879886 (-)
G1392059 NA non-coding downstream 3445 56879069 ~ 56879276 (-)
G1392070 NA non-coding upstream 265 56883421 ~ 56883643 (-)
G1392071 NA non-coding upstream 1913 56885069 ~ 56886571 (-)
G1392077 NA non-coding upstream 7573 56890729 ~ 56890936 (-)
G1392110 NA non-coding upstream 26494 56909650 ~ 56909933 (-)
G1392111 NA non-coding upstream 27323 56910479 ~ 56910785 (-)
G1391869 NA other downstream 341792 56538592 ~ 56540929 (-)
G1391796 LOC100286403 other downstream 445442 56424272 ~ 56437279 (-)
LOC110492371 adcy6 other downstream 589249 56240763 ~ 56293503 (-)
G1391624 NA other downstream 656660 56225414 ~ 56226061 (-)
G1391586 NA other downstream 817859 56064503 ~ 56064862 (-)
G1393949 LOC105029132 other upstream 1321603 58204759 ~ 58207165 (-)
G1393997 LOC106566752 other upstream 1390872 58274028 ~ 58278427 (-)
LOC110492410 LOC106566756 other upstream 1419355 58302511 ~ 58315644 (-)

Expression


Co-expression Network