Gene
RNA
| Item | Value |
|---|---|
| gene id | G1392067 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 56883347 ~ 56883568 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1589769 | True | 222 | lncRNA | 0.45 | 1 | 56883347 | 56883568 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492385 | LOC106566733 | coding | upstream | 52754 | 56825787 ~ 56830593 (+) |
| si:ch73-181d5.4 | LOC106566730 | coding | upstream | 62902 | 56790783 ~ 56820445 (+) |
| LOC118939462 | LOC106566730 | coding | upstream | 92418 | 56779988 ~ 56790929 (+) |
| LOC118939558 | NA | coding | upstream | 108269 | 56767646 ~ 56775078 (+) |
| LOC110492382 | LOC100195767 | coding | upstream | 120865 | 56729499 ~ 56762482 (+) |
| LOC110492387 | LOC106566767 | coding | downstream | 21375 | 56904943 ~ 56907957 (+) |
| LOC110492389 | cdh4 | coding | downstream | 362198 | 57245766 ~ 57788596 (+) |
| LOC110492393 | lsm14b | coding | downstream | 962442 | 57846010 ~ 57850014 (+) |
| LOC110492391 | ss18l1 | coding | downstream | 970333 | 57853901 ~ 57873777 (+) |
| LOC110492396 | y4629 | coding | downstream | 992881 | 57876449 ~ 57887706 (+) |
| G1392060 | NA | non-coding | upstream | 3289 | 56879814 ~ 56880058 (+) |
| G1392048 | NA | non-coding | upstream | 12021 | 56871102 ~ 56871326 (+) |
| G1392046 | NA | non-coding | upstream | 13025 | 56870118 ~ 56870322 (+) |
| G1392042 | NA | non-coding | upstream | 14020 | 56869050 ~ 56869327 (+) |
| G1391577 | NA | non-coding | upstream | 28883 | 56852758 ~ 56854464 (+) |
| G1392066 | NA | non-coding | downstream | 2175 | 56885743 ~ 56886406 (+) |
| G1392088 | NA | non-coding | downstream | 12727 | 56896295 ~ 56896543 (+) |
| G1392105 | NA | non-coding | downstream | 25703 | 56909271 ~ 56909470 (+) |
| G1392107 | NA | non-coding | downstream | 26251 | 56909819 ~ 56910309 (+) |
| G1391254 | NA | other | upstream | 636474 | 56246515 ~ 56247620 (+) |
| G1390616 | LOC106566696 | other | upstream | 1060155 | 55793024 ~ 55823192 (+) |
| G1390527 | NA | other | upstream | 1243048 | 55640022 ~ 55640299 (+) |
| G1390508 | NA | other | upstream | 1250509 | 55628694 ~ 55632838 (+) |
| G1392601 | NA | other | downstream | 482383 | 57365951 ~ 57366517 (+) |
| G1392616 | NA | other | downstream | 513372 | 57396940 ~ 57397177 (+) |
| G1392617 | NA | other | downstream | 517917 | 57401485 ~ 57402530 (+) |
| G1393570 | LOC106566761 | other | downstream | 1535818 | 58419386 ~ 58423502 (+) |
| G1393647 | LOC106613431 | other | downstream | 1682568 | 58566136 ~ 58566794 (+) |
