Gene
RNA
| Item | Value |
|---|---|
| gene id | G1392077 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 56890729 ~ 56890936 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Tc1-like transporase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1589779 | True | 208 | lncRNA | 0.40 | 1 | 56890729 | 56890936 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118939559 | NA | coding | downstream | 12940 | 56876298 ~ 56877789 (-) |
| LOC110491121 | ogfr | coding | downstream | 14809 | 56857071 ~ 56875920 (-) |
| col9a3 | LOC106566732 | coding | downstream | 36210 | 56830760 ~ 56854519 (-) |
| LOC110492380 | LOC106566729 | coding | downstream | 161555 | 56713782 ~ 56729174 (-) |
| LOC110492379 | LOC106566728 | coding | downstream | 210829 | 56570125 ~ 56679900 (-) |
| LOC110492388 | LOC106566734 | coding | upstream | 24723 | 56915659 ~ 56937661 (-) |
| LOC110492390 | taf4 | coding | upstream | 942513 | 57833449 ~ 57845200 (-) |
| LOC110492394 | psma7 | coding | upstream | 959468 | 57849674 ~ 57853907 (-) |
| LOC110492397 | NA | coding | upstream | 996773 | 57887491 ~ 57893319 (-) |
| LOC110492399 | cdh26 | coding | upstream | 1007535 | 57898471 ~ 57921688 (-) |
| G1392071 | NA | non-coding | downstream | 4158 | 56885069 ~ 56886571 (-) |
| G1392070 | NA | non-coding | downstream | 7086 | 56883421 ~ 56883643 (-) |
| G1392069 | NA | non-coding | downstream | 7573 | 56882721 ~ 56883156 (-) |
| G1392068 | NA | non-coding | downstream | 8091 | 56882310 ~ 56882638 (-) |
| G1392065 | NA | non-coding | downstream | 8462 | 56882055 ~ 56882267 (-) |
| G1392110 | NA | non-coding | upstream | 18714 | 56909650 ~ 56909933 (-) |
| G1392111 | NA | non-coding | upstream | 19543 | 56910479 ~ 56910785 (-) |
| G1392112 | NA | non-coding | upstream | 19862 | 56910798 ~ 56911036 (-) |
| G1392191 | NA | non-coding | upstream | 81659 | 56972595 ~ 56972800 (-) |
| G1392192 | NA | non-coding | upstream | 84215 | 56975151 ~ 56975450 (-) |
| G1391869 | NA | other | downstream | 349800 | 56538592 ~ 56540929 (-) |
| G1391796 | LOC100286403 | other | downstream | 453450 | 56424272 ~ 56437279 (-) |
| LOC110492371 | adcy6 | other | downstream | 597257 | 56240763 ~ 56293503 (-) |
| G1391624 | NA | other | downstream | 664668 | 56225414 ~ 56226061 (-) |
| G1391586 | NA | other | downstream | 825867 | 56064503 ~ 56064862 (-) |
| G1393949 | LOC105029132 | other | upstream | 1313823 | 58204759 ~ 58207165 (-) |
| G1393997 | LOC106566752 | other | upstream | 1383092 | 58274028 ~ 58278427 (-) |
| LOC110492410 | LOC106566756 | other | upstream | 1411575 | 58302511 ~ 58315644 (-) |
