G1392228


Basic Information

Item Value
gene id G1392228
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 56995756 ~ 56996266 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1589930
TCATTACCATTTCTTGATCTTAGTTAGCTAATCTCATAGTACTTCACTACATACACAGCCAGGTTAACAATGAGGTAATTGCCACAACGCATTTATTTGATTTGTTTCTGTTCACCATATCAGCATTGTGCTCTCTCTAAATTGGATGCTGGAATGTACCCATTAATGagatcaaattgtatttatcatcagttTTTTCATATTCTGATCCCACTCCGTTTGCTTTGATTTATAGAGTAATTCATGTTTCCATATGCCTCTACTTACCTCATATATCAATAGGGGTTCTCCCTCGCCTGGCCCTGCCTCGCGGTTATTTCCACACTAACAAATCAAAAAAGAATCAAATCAATATATTTAAATGTGCACTTCATCCCATCATGCCGTCAATGAATTCATAGCACAAAACAAAACAGCCTGCATTATTCATGCCGTGGCTTGATGTTGTTGCAGAGCTGGGGAAGCACAGTGTAACTCTCAAACACcagccctctctcccccaccacttTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1589930 True 511 lncRNA 0.39 1 56995756 56996266

Neighbor

gene id symbol gene type direction distance location
LOC110492388 LOC106566734 coding downstream 58095 56915659 ~ 56937661 (-)
LOC118939559 NA coding downstream 117967 56876298 ~ 56877789 (-)
LOC110491121 ogfr coding downstream 119836 56857071 ~ 56875920 (-)
col9a3 LOC106566732 coding downstream 141237 56830760 ~ 56854519 (-)
LOC110492380 LOC106566729 coding downstream 266582 56713782 ~ 56729174 (-)
LOC110492390 taf4 coding upstream 837183 57833449 ~ 57845200 (-)
LOC110492394 psma7 coding upstream 854138 57849674 ~ 57853907 (-)
LOC110492397 NA coding upstream 891443 57887491 ~ 57893319 (-)
LOC110492399 cdh26 coding upstream 902205 57898471 ~ 57921688 (-)
LOC110492401 LOC106566743 coding upstream 969541 57965807 ~ 58000251 (-)
G1392192 NA non-coding downstream 20306 56975151 ~ 56975450 (-)
G1392191 NA non-coding downstream 22956 56972595 ~ 56972800 (-)
G1392112 NA non-coding downstream 84720 56910798 ~ 56911036 (-)
G1392111 NA non-coding downstream 84971 56910479 ~ 56910785 (-)
G1392110 NA non-coding downstream 85823 56909650 ~ 56909933 (-)
G1392229 NA non-coding upstream 377 56996643 ~ 56997147 (-)
G1392227 NA non-coding upstream 3297 56999563 ~ 57000172 (-)
G1392232 NA non-coding upstream 10431 57006697 ~ 57007142 (-)
G1392234 NA non-coding upstream 17114 57013380 ~ 57013647 (-)
G1392237 NA non-coding upstream 19038 57015304 ~ 57015635 (-)
G1391869 NA other downstream 454827 56538592 ~ 56540929 (-)
G1391796 LOC100286403 other downstream 558477 56424272 ~ 56437279 (-)
LOC110492371 adcy6 other downstream 702284 56240763 ~ 56293503 (-)
G1391624 NA other downstream 769695 56225414 ~ 56226061 (-)
G1391586 NA other downstream 930894 56064503 ~ 56064862 (-)
G1393949 LOC105029132 other upstream 1208493 58204759 ~ 58207165 (-)
G1393997 LOC106566752 other upstream 1277762 58274028 ~ 58278427 (-)
LOC110492410 LOC106566756 other upstream 1306245 58302511 ~ 58315644 (-)

Expression


Co-expression Network