Gene
RNA
| Item | Value |
|---|---|
| gene id | G1392600 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 57365679 ~ 57365912 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1590307 | True | 234 | lncRNA | 0.43 | 1 | 57365679 | 57365912 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492387 | LOC106566767 | coding | upstream | 457945 | 56904943 ~ 56907957 (+) |
| LOC110492385 | LOC106566733 | coding | upstream | 535086 | 56825787 ~ 56830593 (+) |
| si:ch73-181d5.4 | LOC106566730 | coding | upstream | 545234 | 56790783 ~ 56820445 (+) |
| LOC118939462 | LOC106566730 | coding | upstream | 574750 | 56779988 ~ 56790929 (+) |
| LOC118939558 | NA | coding | upstream | 590601 | 56767646 ~ 56775078 (+) |
| LOC110492393 | lsm14b | coding | downstream | 480098 | 57846010 ~ 57850014 (+) |
| LOC110492391 | ss18l1 | coding | downstream | 487989 | 57853901 ~ 57873777 (+) |
| LOC110492396 | y4629 | coding | downstream | 510537 | 57876449 ~ 57887706 (+) |
| LOC118936470 | NA | coding | downstream | 589004 | 57954916 ~ 57964183 (+) |
| LOC110492402 | LOC106566744 | coding | downstream | 674643 | 58040555 ~ 58088256 (+) |
| G1392536 | NA | non-coding | upstream | 99810 | 57265611 ~ 57265869 (+) |
| G1392535 | NA | non-coding | upstream | 102823 | 57262654 ~ 57262856 (+) |
| G1392487 | NA | non-coding | upstream | 165022 | 57200434 ~ 57200657 (+) |
| G1392383 | NA | non-coding | upstream | 233367 | 57132075 ~ 57132312 (+) |
| G1392382 | NA | non-coding | upstream | 234051 | 57131317 ~ 57131628 (+) |
| G1392602 | NA | non-coding | downstream | 6764 | 57372676 ~ 57372953 (+) |
| G1392610 | NA | non-coding | downstream | 15370 | 57381282 ~ 57381532 (+) |
| G1392619 | NA | non-coding | downstream | 39655 | 57405567 ~ 57405913 (+) |
| G1392627 | NA | non-coding | downstream | 47992 | 57413904 ~ 57414139 (+) |
| G1392630 | NA | non-coding | downstream | 51425 | 57417337 ~ 57417780 (+) |
| G1391254 | NA | other | upstream | 1118806 | 56246515 ~ 56247620 (+) |
| G1390616 | LOC106566696 | other | upstream | 1542487 | 55793024 ~ 55823192 (+) |
| G1390527 | NA | other | upstream | 1725380 | 55640022 ~ 55640299 (+) |
| G1390508 | NA | other | upstream | 1732841 | 55628694 ~ 55632838 (+) |
| G1392601 | NA | other | downstream | 39 | 57365951 ~ 57366517 (+) |
| G1392616 | NA | other | downstream | 31028 | 57396940 ~ 57397177 (+) |
| G1392617 | NA | other | downstream | 35573 | 57401485 ~ 57402530 (+) |
| G1393570 | LOC106566761 | other | downstream | 1053474 | 58419386 ~ 58423502 (+) |
| G1393647 | LOC106613431 | other | downstream | 1200224 | 58566136 ~ 58566794 (+) |
