Gene
RNA
| Item | Value |
|---|---|
| gene id | G1392851 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 57700086 ~ 57701543 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1590575 | True | 207 | lncRNA | 0.47 | 2 | 57700086 | 57701543 |
57,699,200
57,699,600
57,700,000
57,700,400
57,700,800
57,701,200
57,701,600
57,702,000
57,702,400
57,702,800
57,703,200
57,703,600
57,704,000
57,704,400
57,704,800
57,705,200
57,705,600
57,706,000
NC_048580.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492387 | LOC106566767 | coding | upstream | 792352 | 56904943 ~ 56907957 (+) |
| LOC110492385 | LOC106566733 | coding | upstream | 869493 | 56825787 ~ 56830593 (+) |
| si:ch73-181d5.4 | LOC106566730 | coding | upstream | 879641 | 56790783 ~ 56820445 (+) |
| LOC118939462 | LOC106566730 | coding | upstream | 909157 | 56779988 ~ 56790929 (+) |
| LOC118939558 | NA | coding | upstream | 925008 | 56767646 ~ 56775078 (+) |
| LOC110492393 | lsm14b | coding | downstream | 144467 | 57846010 ~ 57850014 (+) |
| LOC110492391 | ss18l1 | coding | downstream | 152358 | 57853901 ~ 57873777 (+) |
| LOC110492396 | y4629 | coding | downstream | 174906 | 57876449 ~ 57887706 (+) |
| LOC118936470 | NA | coding | downstream | 253373 | 57954916 ~ 57964183 (+) |
| LOC110492402 | LOC106566744 | coding | downstream | 339012 | 58040555 ~ 58088256 (+) |
| G1392790 | NA | non-coding | upstream | 82276 | 57617348 ~ 57617810 (+) |
| G1392630 | NA | non-coding | upstream | 282306 | 57417337 ~ 57417780 (+) |
| G1392627 | NA | non-coding | upstream | 285947 | 57413904 ~ 57414139 (+) |
| G1392619 | NA | non-coding | upstream | 294173 | 57405567 ~ 57405913 (+) |
| G1392610 | NA | non-coding | upstream | 318554 | 57381282 ~ 57381532 (+) |
| G1392890 | NA | non-coding | downstream | 66753 | 57768296 ~ 57768563 (+) |
| G1392894 | NA | non-coding | downstream | 72041 | 57773584 ~ 57773823 (+) |
| G1392520 | NA | non-coding | downstream | 87980 | 57789523 ~ 57789786 (+) |
| G1392519 | NA | non-coding | downstream | 88594 | 57790137 ~ 57790551 (+) |
| G1392517 | NA | non-coding | downstream | 91255 | 57792798 ~ 57794571 (+) |
| G1392617 | NA | other | upstream | 297556 | 57401485 ~ 57402530 (+) |
| G1392616 | NA | other | upstream | 302909 | 57396940 ~ 57397177 (+) |
| G1392601 | NA | other | upstream | 333569 | 57365951 ~ 57366517 (+) |
| G1391254 | NA | other | upstream | 1453213 | 56246515 ~ 56247620 (+) |
| G1393570 | LOC106566761 | other | downstream | 717843 | 58419386 ~ 58423502 (+) |
| G1393647 | LOC106613431 | other | downstream | 864593 | 58566136 ~ 58566794 (+) |
| LOC110492427 | brpf1 | other | downstream | 1577576 | 59278960 ~ 59290653 (+) |
| G1394888 | NA | other | downstream | 1604031 | 59305574 ~ 59306035 (+) |
| G1395932 | NA | other | downstream | 2619260 | 60320803 ~ 60336069 (+) |
