XLOC_032940


Basic Information

Item Value
gene id XLOC_032940
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 32195808 ~ 32196825 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00063995
GTCGAGCTTTAATCTGGCCTCGCCTGACAAGAACCATCCTTTTCGGTGAAGGGTAAGACCACTTAGAGAAAGGCCAATAAGCTCCAGCACAGTGCAGGCTGACGCGGGTGATTTGTCAGCCCCTCGCCGCAGCGCTGGTCACCCCAATGGATTTATCTCAAGCACCACCGCCACGCCAGAAGAATAACAAACGCAAGGGGAGATGGGATGAAAATGTTTCAGGGAGAGGGAGAAAAGGTGTCATTGGGAAGATCTGGGATGCACAGTGAAATTTCTCCTGGGCCGCGGAGCATTGAAGGTGAGGAGCAATATCAAGGAGAGGCAATCACCTCCAGAGCGAAACCCTAACCCCGCTCTCCTTCAGCACCTCCATTTTCTCTGTCTCTACATCCCTCTTTCAATTTAAATTCCCTCCGCCTGCGCTCTCGGTCTCACCTTCTGCGAACACGTGTTTGACAATCATTCCTTCCCCAAGCCCCTTCATTCCTCTATTTGTCAATTTATGAATAAGGAAATGAACTTCAGAAGCCTGTATATCTGATCAGCTCTTGTTTGTTTCTATAACTCTATCTTTATCATGTCTATTTCTTTTAATATCAGGATTTTTGTGATATGCAGAATCCTATTTCATTAATAAACCTATTTGAAAAGCAGGATATATGGGTCAAAGACATTTTGGTGTCtgtatcaaattaaatttactgAAGTGATTTTATTTACGGCACATAGCAAAAAC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00063995 True 736 lncRNA 0.44 2 32195808 32196825

Neighbor

gene id symbol gene type direction distance location
XLOC_032939 foxd3 coding downstream 101978 32092032 ~ 32093830 (-)
XLOC_032938 alg6 coding downstream 108697 32065094 ~ 32087111 (-)
XLOC_032937 efcab7 coding downstream 149825 32029231 ~ 32045983 (-)
XLOC_032936 pgm1 coding downstream 170583 32010183 ~ 32025225 (-)
XLOC_032934 ror1 coding downstream 207868 31772182 ~ 31987940 (-)
XLOC_032941 atg4c coding upstream 103193 32300018 ~ 32315494 (-)
XLOC_032942 angptl3 coding upstream 147372 32344197 ~ 32349153 (-)
XLOC_032943 usp1 coding upstream 197677 32394502 ~ 32411727 (-)
XLOC_032944 NA coding upstream 218251 32415076 ~ 32416753 (-)
XLOC_032945 LO017955.2 coding upstream 377171 32573996 ~ 32592792 (-)
XLOC_032933 NA non-coding downstream 446024 31745291 ~ 31749784 (-)
XLOC_032927 CR847887.1 non-coding downstream 1048553 31069530 ~ 31147255 (-)
XLOC_032920 NA non-coding downstream 1736793 30452287 ~ 30459015 (-)
XLOC_032919 FP236850.1 non-coding downstream 1973838 30221834 ~ 30221970 (-)
XLOC_032918 FP236850.2 non-coding downstream 1992771 30202921 ~ 30203037 (-)
XLOC_032946 NA non-coding upstream 490177 32687002 ~ 32687386 (-)
XLOC_032952 NA non-coding upstream 993757 33190582 ~ 33210388 (-)
XLOC_032953 CR933860.1 non-coding upstream 1246509 33443334 ~ 33443455 (-)

Expression


Co-expression Network