Gene
RNA
| Item | Value |
|---|---|
| gene id | G1393947 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 58198519 ~ 58198778 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1591822 | True | 260 | lncRNA | 0.38 | 1 | 58198519 | 58198778 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110491122 | LOC106566746 | coding | downstream | 36439 | 58105100 ~ 58162080 (-) |
| LOC110492403 | LOC106566745 | coding | downstream | 100783 | 58093542 ~ 58097736 (-) |
| LOC118939560 | NA | coding | downstream | 120086 | 58073907 ~ 58078433 (-) |
| LOC118939561 | NA | coding | downstream | 127768 | 58070188 ~ 58070751 (-) |
| LOC110492401 | LOC106566743 | coding | downstream | 198268 | 57965807 ~ 58000251 (-) |
| LOC100136178 | LOC100136178 | coding | upstream | 30283 | 58229061 ~ 58235899 (-) |
| LOC110492410 | LOC106566756 | coding | upstream | 103733 | 58302511 ~ 58315644 (-) |
| LOC110492413 | LOC106566757 | coding | upstream | 167941 | 58366719 ~ 58394501 (-) |
| LOC110492417 | LOC106566761 | coding | upstream | 224126 | 58422904 ~ 58667831 (-) |
| LOC110491123 | LOC106566759 | coding | upstream | 476960 | 58675738 ~ 58730339 (-) |
| G1393945 | LOC106566749 | non-coding | downstream | 3162 | 58191744 ~ 58195357 (-) |
| G1393929 | NA | non-coding | downstream | 28893 | 58168843 ~ 58169626 (-) |
| G1393920 | NA | non-coding | downstream | 48625 | 58149598 ~ 58149894 (-) |
| G1393918 | NA | non-coding | downstream | 52459 | 58145701 ~ 58146060 (-) |
| G1393955 | NA | non-coding | upstream | 13747 | 58212525 ~ 58212737 (-) |
| G1393979 | NA | non-coding | upstream | 51364 | 58250142 ~ 58250445 (-) |
| G1393983 | NA | non-coding | upstream | 56064 | 58254842 ~ 58255061 (-) |
| G1393995 | LOC106571908 | non-coding | upstream | 69001 | 58267779 ~ 58268135 (-) |
| G1394005 | NA | non-coding | upstream | 95908 | 58294686 ~ 58294948 (-) |
| LOC110492397 | NA | other | downstream | 305237 | 57887491 ~ 57893319 (-) |
| LOC110492394 | psma7 | other | downstream | 344733 | 57849674 ~ 57853907 (-) |
| G1391869 | NA | other | downstream | 1657590 | 56538592 ~ 56540929 (-) |
| G1391796 | LOC100286403 | other | downstream | 1761240 | 56424272 ~ 56437279 (-) |
| LOC110492371 | adcy6 | other | downstream | 1905047 | 56240763 ~ 56293503 (-) |
| G1393949 | LOC105029132 | other | upstream | 5981 | 58204759 ~ 58207165 (-) |
| G1393997 | LOC106566752 | other | upstream | 75250 | 58274028 ~ 58278427 (-) |
| G1394067 | NA | other | upstream | 225680 | 58424458 ~ 58428113 (-) |
| G1394341 | NA | other | upstream | 548092 | 58746870 ~ 58747299 (-) |
