G1393949 (LOC105029132)


Basic Information

Item Value
gene id G1393949
gene name LOC105029132
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 58204759 ~ 58207165 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1591827
TGGGTCAATTTAACTTCACATCCTTCATGATTCAGAGAAAAGGTCCCCCGTTACCAAGCGAATCTTATGTACATATTTTACAAACACATGCCAAATAAACACAGCCCTTTGATTTATTTCAGAGGCTGTAACAAAATACAGATATGTTATATAAAATCCCTGAAAATGTCTCTCCATGAGGTAAGAACACATTTAGCATCATCTTCAATCGGTTcatttcattccctctctctcattcactaaACCATTCAACTTTGAGCCGACTCGTTCCGAGACATTACTGGCAAAAACAGAACGGATCAAAACACACTGCATGCATCCCTTAACATGGTTCTGCtaaaggaagagtagctgcaggcTGAAGATTGTGTCTATACATGACTTATCCATGACTTAATAAACAAGGTTCAAATGTCCATTATGGATCATAACTACAAGTCGTGAATTTCAAGCATGGCATATGACAATCCTATACTATATCCAGGTTAAGACAGTTAAGTGTTATGTTAACTTAGAAGGTGTGATAAAGGCCACAGGAACAACAGGCAGAAGAGGTACAGAACAGAAATTCAACTTGATTACATGCAGACAATGAAATGCTATTATAATTATTACAATTTACATGAGCTTTACAAAACAAAACTATAGGTGTTTCATCTTTAACATTTTGCAGAGGGTCTCAGTTCAACAAAGATAAAAGAGTAAtgctctgacatactgtattgcaTTCCTACATGATCAAATGTTTACTCTGAAGATGACACAAAAGTAGGGAAAATAGCATAGCACTTGTCAACTACTGTTTTCCAAGATCACTCCATTCTGATGTTAAGAGAGAGAGCTGCAAATGAAGACGTTTAAAACAGTCATCAACAGGAACGTTAGTCATCAACGGGAACGTTACAGCCATCAACGGGAACGTTACAGCCATCAACGGGAACGTTACAGTCATCAACGGGAACGTTACAGTCATCAACGGGAACGTTACAGTCATCAACAGGAATGTTAGTCATCAACAGGAACGTTACAGCCATCAACAGGAACGTTACAGCCATCAACAGGAACGTTACAGTCATCAACAGGAATGTTACAGCCATCAACAGGAACGTTAAAGCCATCAAAAGGAACGTTACAGTCATCAAAAGGAACGTTACAGTCATCAAAAGGAACGTTACAGTCATCAAAAGGAATGTTACAGACATCAAAATGAACGTTACAGCCATCAACAGGAACGTTACAGCCATCAAAAGGAATGTTACAGTCATCAAAATGAACGTTACAGTCATTCAAGGCCAACTTAAAGTAGCCCCATCTCCTCAGCAAAAGTACCATTCAAAAGAATCTCTGTTTGGTCCCAGAAAACATTGATTCACATTCTCCATGGCCAACCTCTTCCTTCAGACCAACGCATTAGCCACATTTGTTAGGAAAACAACTGACACATCCACATTACAGCTGGAGAATATGAAATAACAGTTAAACCATCTCAGAGTTAGCTCATAATAATGACATTTCCTGCAATAACCATACCATTATTCACTATTATAGACGATAAGGCATCAGAGCGTGGACCAAACAAAGTATGTACTTTTTTAAAGCATACTGGGGAGCCTCCAGTAAAAATCCATACTTCAATCACTTGCACGACAGGTGagcctcctcagtctctctctaccaGCTGCAGTTCCAGGACTCTTTTCCTTTTCCTGACAGGCTACAAAAGACCATGTAGACACCGATGAAGCAACATGGCCGCTAAACCCTGCCTTCTCCGTCTCCTCACGTCGACTCCAGAGTGTCCAACTGGAACACGTTGTGATTGGTCGGCGTGGTGAAGTAGAGCTGCTCATTGGAGGAGGAGCGGTTGTCACACAGACTGTGCAGCCCCAGTGTCCTCTCGAAGTCCAGCAGTTGGCCCATGAAGTTGAAGTTGGGGGAGATGTTGGACTTCTTCCTCTTGACAAAGTCATAGGCGTCATTGAGAGACAGGTTGAGCCTCTGCATCAAGTAGGCCACGGTCACGGTCACAGAGCGGCTGATACCAGCCAGACAGTGT
>TU1591828
TGGGTCAATTTAACTTCACATCCTTCATGATTCAGAGAAAAGGTCCCCCGTTACCAAGCGAATCTTATGTACATATTTTACAAACACATGCCAAATAAACACAGCCCTTTGATTTATTTCAGAGGCTGTAACAAAATACAGATATGTTATATAAAATCCCTGAAAATGTCTCTCCATGAGGTAAGAACACATTTAGCATCATCTTCAATCGGTTcatttcattccctctctctcattcactaaACCATTCAACTTTGAGCCGACTCGTTCCGAGACATTACTGGCAAAAACAGAACGGATCAAAACACACTGCATGCATCCCTTAACATGGTTCTGCtaaaggaagagtagctgcaggcTGAAGATTGTGTCTATACATGACTTATCCATGACTTAATAAACAAGGTTCAAATGTCCATTATGGATCATAACTACAAGTCGTGAATTTCAAGCATGGCATATGACAATCCTATACTATATCCAGGTTAAGACAGTTAAGTGTTATGTTAACTTAGAAGGTGTGATAAAGGCCACAGGAACAACAGGCAGAAGAGGTACAGAACAGAAATTCAACTTGATTACATGCAGACAATGAAATGCTATTATAATTATTACAATTTACATGAGCTTTACAAAACAAAACTATAGGTGTTTCATCTTTAACATTTTGCAGAGGGTCTCAGTTCAACAAAGATAAAAGAGTAAtgctctgacatactgtattgcaTTCCTACATGATCAAATGTTTACTCTGAAGATGACACAAAAGTAGGGAAAATAGCATAGCACTTGTCAACTACTGTTTTCCAAGATCACTCCATTCTGATGTTAAGAGAGAGAGCTGCAAATGAAGACGTTTAAAACAGTCATCAACAGGAACGTTAGTCATCAACGGGAACGTTACAGCCATCAACGGGAACGTTACAGCCATCAACGGGAACGTTACAGTCATCAACGGGAACGTTACAGTCATCAACGGGAATGTTACAGCCATCAACAGGAACGTTACAATCATCAACAGGAATGTTAGTCATCAACAGGAACGTTACAGCCATCAACAGGAACGTTACAGCCATCAACAGGAACGTTACAGCCATCAACAGGAATGTTACAGTCATCAACAGGAATGTTAGTCATCAACAGGAACGTTACAGCCATCAACAGGAACGTTACAGTCATCAACAGGAATGTTACAGTCATCAACAGGAATGTTAGTCATCAACAGGAACGTTACAGTCATCAACAGGAACGTTACAGTCATCAACAGGAATGTTACAGCCATCAACAGGAACGTTAAAGCCATCAAAAGGAACGTTACAGTCATCAAAAGGAACGTTACAGTCATCAAAAGGAACGTTACAGTCATCAAAAGGAATGTTACAGACATCAAAATGAACGTTACAGCCATCAACAGGAACGTTACAGCCATCAAAAGGAATGTTACAGTCATCAAAATGAACGTTACAGTCATTCAAGGCCAACTTAAAGTAGCCCCATCTCCTCAGCAAAAGTACCATTCAAAAGAATCTCTGTTTGGTCCCAGAAAACATTGATTCACATTCTCCATGGCCAACCTCTTCCTTCAGACCAACGCATTAGCCACATTTGTTAGGAAAACAACTGACACATCCACATTACAGCTGGAGAATATGAAATAACAGTTAAACCATCTCAGAGTTAGCTCATAATAATGACATTTCCTGCAATAACCATACCATTATTCACTATTATAGACGATAAGGCATCAGAGCGTGGACCAAACAAAGTATGTACTTTTTTAAAGCATACTGGGGAGCCTCCAGTAAAAATCCATACTTCAATCACTTGCACGACAGGTGagcctcctcagtctctctctaccaGCTGCAGTTCCAGGACTCTTTTCCTTTTCCTGACAGGCTACAAAAGACCATGTAGACACCGATGAAGCAACATGGCCGCTAAACCCTGCCTTCTCCGTCTCCTCACGTCGACTCCAGAGTGTCCAACTGGAACACGTTGTGATTGGTCGGCGTGGTGAAGTAGAGCTGCTCATTGGAGGAGGAGCGGTTGTCACACAGACTGTGCAGCCCCAGTGTCCTCTCGAAGTCCAGCAGTTGGCCCATGAAGTTGAAGTTGGGGGAGATGTTGGACTTCTTCCTCTTGACAAAGTCATAGGCGTCATTGAGAGACAGGTTGAGCCTCTGCATCAAGTAGGCCACGGTCACGGTCACAGAGCGGCTGATACCAGCCAGACAGTGT

Function

NR:

description
dual specificity protein phosphatase 7-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1591827 False 2056 TUCP 0.42 2 58204759 58207165
TU1591828 True 2241 TUCP 0.42 2 58204759 58207165

Neighbor

gene id symbol gene type direction distance location
LOC110491122 LOC106566746 coding downstream 42679 58105100 ~ 58162080 (-)
LOC110492403 LOC106566745 coding downstream 107023 58093542 ~ 58097736 (-)
LOC118939560 NA coding downstream 126326 58073907 ~ 58078433 (-)
LOC118939561 NA coding downstream 134008 58070188 ~ 58070751 (-)
LOC110492401 LOC106566743 coding downstream 204508 57965807 ~ 58000251 (-)
LOC100136178 LOC100136178 coding upstream 21896 58229061 ~ 58235899 (-)
LOC110492410 LOC106566756 coding upstream 95346 58302511 ~ 58315644 (-)
LOC110492413 LOC106566757 coding upstream 159554 58366719 ~ 58394501 (-)
LOC110492417 LOC106566761 coding upstream 215739 58422904 ~ 58667831 (-)
LOC110491123 LOC106566759 coding upstream 468573 58675738 ~ 58730339 (-)
G1393947 NA non-coding downstream 5981 58198519 ~ 58198778 (-)
G1393945 LOC106566749 non-coding downstream 9402 58191744 ~ 58195357 (-)
G1393929 NA non-coding downstream 35133 58168843 ~ 58169626 (-)
G1393920 NA non-coding downstream 54865 58149598 ~ 58149894 (-)
G1393955 NA non-coding upstream 5360 58212525 ~ 58212737 (-)
G1393979 NA non-coding upstream 42977 58250142 ~ 58250445 (-)
G1393983 NA non-coding upstream 47677 58254842 ~ 58255061 (-)
G1393995 LOC106571908 non-coding upstream 60614 58267779 ~ 58268135 (-)
G1394005 NA non-coding upstream 87521 58294686 ~ 58294948 (-)
LOC110492397 NA other downstream 311477 57887491 ~ 57893319 (-)
LOC110492394 psma7 other downstream 350973 57849674 ~ 57853907 (-)
G1391869 NA other downstream 1663830 56538592 ~ 56540929 (-)
G1391796 LOC100286403 other downstream 1767480 56424272 ~ 56437279 (-)
LOC110492371 adcy6 other downstream 1911287 56240763 ~ 56293503 (-)
G1393997 LOC106566752 other upstream 66863 58274028 ~ 58278427 (-)
G1394067 NA other upstream 217293 58424458 ~ 58428113 (-)
G1394341 NA other upstream 539705 58746870 ~ 58747299 (-)
LOC110491124 LOC106566606 other upstream 631591 58836641 ~ 58847057 (-)

Expression


Co-expression Network