Gene
RNA
| Item | Value |
|---|---|
| gene id | G1393995 |
| gene name | LOC106571908 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 58267779 ~ 58268135 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| sodium- and chloride-dependent GABA transporter 1-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1591889 | True | 267 | lncRNA | 0.43 | 2 | 58267779 | 58268135 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC100136178 | LOC100136178 | coding | downstream | 31880 | 58229061 ~ 58235899 (-) |
| LOC110491122 | LOC106566746 | coding | downstream | 105699 | 58105100 ~ 58162080 (-) |
| LOC110492403 | LOC106566745 | coding | downstream | 170043 | 58093542 ~ 58097736 (-) |
| LOC118939560 | NA | coding | downstream | 189346 | 58073907 ~ 58078433 (-) |
| LOC118939561 | NA | coding | downstream | 197028 | 58070188 ~ 58070751 (-) |
| LOC110492410 | LOC106566756 | coding | upstream | 34376 | 58302511 ~ 58315644 (-) |
| LOC110492413 | LOC106566757 | coding | upstream | 98584 | 58366719 ~ 58394501 (-) |
| LOC110492417 | LOC106566761 | coding | upstream | 154769 | 58422904 ~ 58667831 (-) |
| LOC110491123 | LOC106566759 | coding | upstream | 407603 | 58675738 ~ 58730339 (-) |
| LOC110491124 | LOC106566606 | coding | upstream | 568506 | 58836641 ~ 58847057 (-) |
| G1393983 | NA | non-coding | downstream | 12718 | 58254842 ~ 58255061 (-) |
| G1393979 | NA | non-coding | downstream | 17334 | 58250142 ~ 58250445 (-) |
| G1393955 | NA | non-coding | downstream | 55042 | 58212525 ~ 58212737 (-) |
| G1393947 | NA | non-coding | downstream | 69001 | 58198519 ~ 58198778 (-) |
| G1393945 | LOC106566749 | non-coding | downstream | 72422 | 58191744 ~ 58195357 (-) |
| G1394005 | NA | non-coding | upstream | 26551 | 58294686 ~ 58294948 (-) |
| G1394018 | LOC106566755 | non-coding | upstream | 61570 | 58329705 ~ 58355527 (-) |
| G1394070 | NA | non-coding | upstream | 172922 | 58441057 ~ 58441816 (-) |
| G1394128 | NA | non-coding | upstream | 304301 | 58572436 ~ 58572717 (-) |
| G1394129 | NA | non-coding | upstream | 306567 | 58574702 ~ 58574912 (-) |
| G1393949 | LOC105029132 | other | downstream | 60614 | 58204759 ~ 58207165 (-) |
| LOC110492397 | NA | other | downstream | 374497 | 57887491 ~ 57893319 (-) |
| LOC110492394 | psma7 | other | downstream | 413993 | 57849674 ~ 57853907 (-) |
| G1391869 | NA | other | downstream | 1726850 | 56538592 ~ 56540929 (-) |
| G1391796 | LOC100286403 | other | downstream | 1830500 | 56424272 ~ 56437279 (-) |
| G1393997 | LOC106566752 | other | upstream | 5893 | 58274028 ~ 58278427 (-) |
| G1394067 | NA | other | upstream | 156323 | 58424458 ~ 58428113 (-) |
| G1394341 | NA | other | upstream | 478735 | 58746870 ~ 58747299 (-) |
