Gene
RNA
| Item | Value |
|---|---|
| gene id | G1393570 |
| gene name | LOC106566761 |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 58419386 ~ 58423502 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| LOW QUALITY PROTEIN: IQ motif and SEC7 domain-containing protein 1-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1591401 | True | 3955 | TUCP | 0.44 | 2 | 58419386 | 58423502 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492415 | LOC106566758 | coding | upstream | 13319 | 58399629 ~ 58406067 (+) |
| LOC110492416 | cnbp | coding | upstream | 20229 | 58395461 ~ 58399157 (+) |
| LOC110492412 | LOC106566754 | coding | upstream | 56074 | 58347453 ~ 58363312 (+) |
| LOC110492411 | LOC106566755 | coding | upstream | 84222 | 58318031 ~ 58335164 (+) |
| LOC110492407 | LOC106566752 | coding | upstream | 140933 | 58263365 ~ 58278453 (+) |
| LOC118939562 | NA | coding | downstream | 62405 | 58485907 ~ 58497366 (+) |
| LOC110492418 | LOC106571900 | coding | downstream | 320388 | 58743890 ~ 58792266 (+) |
| LOC110492421 | LOC106566609 | coding | downstream | 481449 | 58904951 ~ 58988807 (+) |
| LOC110492422 | LOC106566610 | coding | downstream | 576735 | 59000237 ~ 59112924 (+) |
| LOC110492423 | LOC106566613 | coding | downstream | 721547 | 59145049 ~ 59158966 (+) |
| G1393559 | NA | non-coding | upstream | 7181 | 58383175 ~ 58412205 (+) |
| G1393554 | NA | non-coding | upstream | 38685 | 58379224 ~ 58380701 (+) |
| G1393534 | NA | non-coding | upstream | 124997 | 58294160 ~ 58294389 (+) |
| G1393527 | NA | non-coding | upstream | 136914 | 58282190 ~ 58282472 (+) |
| G1393517 | NA | non-coding | upstream | 169247 | 58249781 ~ 58250139 (+) |
| G1393642 | NA | non-coding | downstream | 137839 | 58561341 ~ 58561684 (+) |
| G1393644 | NA | non-coding | downstream | 140238 | 58563740 ~ 58564046 (+) |
| G1393645 | NA | non-coding | downstream | 141117 | 58564619 ~ 58564897 (+) |
| G1393658 | NA | non-coding | downstream | 156900 | 58580402 ~ 58580603 (+) |
| G1393659 | NA | non-coding | downstream | 157104 | 58580606 ~ 58580818 (+) |
| G1392617 | NA | other | upstream | 1016856 | 57401485 ~ 57402530 (+) |
| G1392616 | NA | other | upstream | 1022209 | 57396940 ~ 57397177 (+) |
| G1392601 | NA | other | upstream | 1052869 | 57365951 ~ 57366517 (+) |
| LOC118939462 | LOC106566730 | other | upstream | 1628705 | 56779988 ~ 56790929 (+) |
| G1391254 | NA | other | upstream | 2172513 | 56246515 ~ 56247620 (+) |
| G1393647 | LOC106613431 | other | downstream | 142634 | 58566136 ~ 58566794 (+) |
| LOC110492427 | brpf1 | other | downstream | 855617 | 59278960 ~ 59290653 (+) |
| G1394888 | NA | other | downstream | 882072 | 59305574 ~ 59306035 (+) |
| G1395932 | NA | other | downstream | 1897301 | 60320803 ~ 60336069 (+) |
| G1396296 | LOC106566651 | other | downstream | 2223758 | 60647260 ~ 60648050 (+) |
| species | gene id | symbol | gene type | chromosome | NCBI id | location |
|---|---|---|---|---|---|---|
| bowfin (Amia calva) | G53456 | NA | non-coding | CM030126.1 | CM030126.1 | 18399362 ~ 18400842 (+) |
