Gene
RNA
| Item | Value |
|---|---|
| gene id | G1393666 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 58587079 ~ 58587307 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1591503 | True | 229 | lncRNA | 0.31 | 1 | 58587079 | 58587307 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118939562 | NA | coding | upstream | 89713 | 58485907 ~ 58497366 (+) |
| LOC110492415 | LOC106566758 | coding | upstream | 181012 | 58399629 ~ 58406067 (+) |
| LOC110492416 | cnbp | coding | upstream | 187922 | 58395461 ~ 58399157 (+) |
| LOC110492412 | LOC106566754 | coding | upstream | 223767 | 58347453 ~ 58363312 (+) |
| LOC110492411 | LOC106566755 | coding | upstream | 251915 | 58318031 ~ 58335164 (+) |
| LOC110492418 | LOC106571900 | coding | downstream | 156583 | 58743890 ~ 58792266 (+) |
| LOC110492421 | LOC106566609 | coding | downstream | 317644 | 58904951 ~ 58988807 (+) |
| LOC110492422 | LOC106566610 | coding | downstream | 412930 | 59000237 ~ 59112924 (+) |
| LOC110492423 | LOC106566613 | coding | downstream | 557742 | 59145049 ~ 59158966 (+) |
| LOC110492424 | LOC106566614 | coding | downstream | 586688 | 59173995 ~ 59178572 (+) |
| G1393665 | NA | non-coding | upstream | 399 | 58586452 ~ 58586680 (+) |
| G1393662 | NA | non-coding | upstream | 3611 | 58583120 ~ 58583468 (+) |
| G1393660 | NA | non-coding | upstream | 5880 | 58580885 ~ 58581199 (+) |
| G1393659 | NA | non-coding | upstream | 6261 | 58580606 ~ 58580818 (+) |
| G1393658 | NA | non-coding | upstream | 6476 | 58580402 ~ 58580603 (+) |
| G1394210 | NA | non-coding | downstream | 104038 | 58691345 ~ 58718116 (+) |
| G1394209 | NA | non-coding | downstream | 104607 | 58691914 ~ 58693026 (+) |
| G1394248 | NA | non-coding | downstream | 143126 | 58730433 ~ 58730634 (+) |
| G1394296 | NA | non-coding | downstream | 209819 | 58797126 ~ 58797403 (+) |
| G1393647 | LOC106613431 | other | upstream | 20285 | 58566136 ~ 58566794 (+) |
| G1393570 | LOC106566761 | other | upstream | 163577 | 58419386 ~ 58423502 (+) |
| G1392617 | NA | other | upstream | 1184549 | 57401485 ~ 57402530 (+) |
| G1392616 | NA | other | upstream | 1189902 | 57396940 ~ 57397177 (+) |
| G1392601 | NA | other | upstream | 1220562 | 57365951 ~ 57366517 (+) |
| LOC110492427 | brpf1 | other | downstream | 691812 | 59278960 ~ 59290653 (+) |
| G1394888 | NA | other | downstream | 718267 | 59305574 ~ 59306035 (+) |
| G1395932 | NA | other | downstream | 1733496 | 60320803 ~ 60336069 (+) |
| G1396296 | LOC106566651 | other | downstream | 2059953 | 60647260 ~ 60648050 (+) |
| G1396313 | NA | other | downstream | 2110556 | 60697863 ~ 60698313 (+) |
