Gene
RNA
| Item | Value |
|---|---|
| gene id | G1394313 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 58814377 ~ 58814700 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1592252 | True | 324 | lncRNA | 0.39 | 1 | 58814377 | 58814700 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492418 | LOC106571900 | coding | upstream | 22183 | 58743890 ~ 58792266 (+) |
| LOC118939562 | NA | coding | upstream | 317011 | 58485907 ~ 58497366 (+) |
| LOC110492415 | LOC106566758 | coding | upstream | 408310 | 58399629 ~ 58406067 (+) |
| LOC110492416 | cnbp | coding | upstream | 415220 | 58395461 ~ 58399157 (+) |
| LOC110492412 | LOC106566754 | coding | upstream | 451065 | 58347453 ~ 58363312 (+) |
| LOC110492421 | LOC106566609 | coding | downstream | 90251 | 58904951 ~ 58988807 (+) |
| LOC110492422 | LOC106566610 | coding | downstream | 185537 | 59000237 ~ 59112924 (+) |
| LOC110492423 | LOC106566613 | coding | downstream | 330349 | 59145049 ~ 59158966 (+) |
| LOC110492424 | LOC106566614 | coding | downstream | 359295 | 59173995 ~ 59178572 (+) |
| LOC110492426 | LOC106566616 | coding | downstream | 395367 | 59210067 ~ 59275474 (+) |
| G1394312 | NA | non-coding | upstream | 1565 | 58812527 ~ 58812812 (+) |
| G1394296 | NA | non-coding | upstream | 16974 | 58797126 ~ 58797403 (+) |
| G1394248 | NA | non-coding | upstream | 83743 | 58730433 ~ 58730634 (+) |
| G1394210 | NA | non-coding | upstream | 96261 | 58691345 ~ 58718116 (+) |
| G1394416 | NA | non-coding | downstream | 36551 | 58851251 ~ 58851494 (+) |
| G1394426 | NA | non-coding | downstream | 44620 | 58859320 ~ 58859523 (+) |
| G1394459 | NA | non-coding | downstream | 75042 | 58889742 ~ 58892732 (+) |
| G1394467 | NA | non-coding | downstream | 84669 | 58899369 ~ 58899843 (+) |
| G1393647 | LOC106613431 | other | upstream | 247583 | 58566136 ~ 58566794 (+) |
| G1393570 | LOC106566761 | other | upstream | 390875 | 58419386 ~ 58423502 (+) |
| G1392617 | NA | other | upstream | 1411847 | 57401485 ~ 57402530 (+) |
| G1392616 | NA | other | upstream | 1417200 | 57396940 ~ 57397177 (+) |
| G1392601 | NA | other | upstream | 1447860 | 57365951 ~ 57366517 (+) |
| LOC110492427 | brpf1 | other | downstream | 464419 | 59278960 ~ 59290653 (+) |
| G1394888 | NA | other | downstream | 490874 | 59305574 ~ 59306035 (+) |
| G1395932 | NA | other | downstream | 1506103 | 60320803 ~ 60336069 (+) |
| G1396296 | LOC106566651 | other | downstream | 1832560 | 60647260 ~ 60648050 (+) |
| G1396313 | NA | other | downstream | 1883163 | 60697863 ~ 60698313 (+) |
