Gene
RNA
| Item | Value |
|---|---|
| gene id | G1394447 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 58878052 ~ 58878279 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1592401 | True | 228 | lncRNA | 0.36 | 1 | 58878052 | 58878279 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118939563 | cf105 | coding | downstream | 550 | 58871749 ~ 58877502 (-) |
| LOC110492419 | LOC106566607 | coding | downstream | 7261 | 58865549 ~ 58870791 (-) |
| LOC110491124 | LOC106566606 | coding | downstream | 30995 | 58836641 ~ 58847057 (-) |
| LOC110491123 | LOC106566759 | coding | downstream | 147713 | 58675738 ~ 58730339 (-) |
| LOC110492417 | LOC106566761 | coding | downstream | 210221 | 58422904 ~ 58667831 (-) |
| LOC110492420 | NA | coding | upstream | 8397 | 58886676 ~ 58896965 (-) |
| LOC118939564 | NA | coding | upstream | 141625 | 59019837 ~ 59051938 (-) |
| LOC110492425 | LOC106566615 | coding | upstream | 297655 | 59175934 ~ 59206144 (-) |
| plxnd1 | LOC106566625 | coding | upstream | 535733 | 59413470 ~ 59538798 (-) |
| LOC110492431 | LOC106566626 | coding | upstream | 663108 | 59541387 ~ 59640728 (-) |
| G1394399 | NA | non-coding | downstream | 50892 | 58826797 ~ 58827160 (-) |
| G1394390 | NA | non-coding | downstream | 65051 | 58812747 ~ 58813001 (-) |
| G1394384 | NA | non-coding | downstream | 71528 | 58806312 ~ 58806524 (-) |
| G1394376 | LOC106566675 | non-coding | downstream | 87642 | 58788659 ~ 58790410 (-) |
| G1394250 | NA | non-coding | downstream | 146121 | 58731701 ~ 58731931 (-) |
| G1394450 | NA | non-coding | upstream | 1108 | 58879387 ~ 58879857 (-) |
| G1394656 | NA | non-coding | upstream | 26046 | 58904325 ~ 58904573 (-) |
| G1394670 | NA | non-coding | upstream | 54762 | 58933041 ~ 58935197 (-) |
| G1394673 | NA | non-coding | upstream | 67664 | 58945943 ~ 58998411 (-) |
| G1394341 | NA | other | downstream | 130753 | 58746870 ~ 58747299 (-) |
| G1394067 | NA | other | downstream | 449939 | 58424458 ~ 58428113 (-) |
| LOC110492410 | LOC106566756 | other | downstream | 571411 | 58302511 ~ 58315644 (-) |
| G1393997 | LOC106566752 | other | downstream | 599625 | 58274028 ~ 58278427 (-) |
| G1394768 | LOC106566610 | other | upstream | 233093 | 59111372 ~ 59112897 (-) |
| G1394978 | LOC106566621 | other | upstream | 475921 | 59354200 ~ 59356849 (-) |
| G1396467 | NA | other | upstream | 1676477 | 60554756 ~ 60582035 (-) |
| LOC118939463 | NA | other | upstream | 1783277 | 60661556 ~ 60672085 (-) |
| G1396543 | NA | other | upstream | 1815330 | 60693609 ~ 60694036 (-) |
