XLOC_032945 (LO017955.2)



Basic Information


Item Value
gene id XLOC_032945
gene name LO017955.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 32573996 ~ 32592792 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00064004
GCAGCCTTTCAgattgagcctatgttgaattGCTCATTCAGCAGATTCAATTACAAATATTAACGATGAAATCAATCTGTGCGATAACCATTTGGACAGATGTCACGCTAATGGTGCCAATAAGAGCGGGACGGAGATGATAGTGAGGACATGACCATTGGTGACCACTCTGACACTGGCAGTGATAAAGACATCAAGGACAATGTCTATGGGGCCATTGGAAAAAGCTTGACCACCAGGG

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000117631

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00064004 True 241 lncRNA 0.44 3 32573996 32592792

Neighbor


gene id symbol gene type direction distance location
XLOC_032944 NA coding downstream 157243 32415076 ~ 32416753 (-)
XLOC_032943 usp1 coding downstream 162269 32394502 ~ 32411727 (-)
XLOC_032942 angptl3 coding downstream 224843 32344197 ~ 32349153 (-)
XLOC_032941 atg4c coding downstream 258502 32300018 ~ 32315494 (-)
XLOC_032940 NA coding downstream 377171 32195808 ~ 32196825 (-)
XLOC_032946 NA coding upstream 94210 32687002 ~ 32687386 (-)
XLOC_032947 mafaa coding upstream 106567 32699359 ~ 32703317 (-)
XLOC_032948 zc3h3 coding upstream 124646 32717438 ~ 32834385 (-)
XLOC_032949 adcyap1r1a coding upstream 373958 32966750 ~ 33023745 (-)
XLOC_032950 si:dkey-170g13.2 coding upstream 477974 33070766 ~ 33075576 (-)
XLOC_032933 NA non-coding downstream 824212 31745291 ~ 31749784 (-)
XLOC_032927 CR847887.1 non-coding downstream 1426741 31069530 ~ 31147255 (-)
XLOC_032920 NA non-coding downstream 2114981 30452287 ~ 30459015 (-)
XLOC_032952 NA non-coding upstream 597790 33190582 ~ 33210388 (-)
XLOC_032953 CR933860.1 non-coding upstream 850542 33443334 ~ 33443455 (-)
XLOC_032955 CR855206.1 non-coding upstream 1133255 33726047 ~ 33726148 (-)
XLOC_032962 NA non-coding upstream 1565825 34158617 ~ 34177898 (-)

Expression



Co-expression Network