Gene
RNA
| Item | Value |
|---|---|
| gene id | G1394737 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 59040849 ~ 59079877 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| FYVE, RhoGEF and PH domain-containing protein 3-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1592725 | True | 417 | lncRNA | 0.55 | 2 | 59040849 | 59079877 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118939564 | NA | coding | downstream | 14723 | 59019837 ~ 59051938 (-) |
| LOC110492420 | NA | coding | downstream | 143884 | 58886676 ~ 58896965 (-) |
| LOC118939563 | cf105 | coding | downstream | 163347 | 58871749 ~ 58877502 (-) |
| LOC110492419 | LOC106566607 | coding | downstream | 170058 | 58865549 ~ 58870791 (-) |
| LOC110491124 | LOC106566606 | coding | downstream | 193792 | 58836641 ~ 58847057 (-) |
| LOC110492425 | LOC106566615 | coding | upstream | 96057 | 59175934 ~ 59206144 (-) |
| plxnd1 | LOC106566625 | coding | upstream | 334135 | 59413470 ~ 59538798 (-) |
| LOC110492431 | LOC106566626 | coding | upstream | 461510 | 59541387 ~ 59640728 (-) |
| mrps25 | mrps25 | coding | upstream | 665499 | 59745376 ~ 59752581 (-) |
| nr2c2 | nr2c2 | coding | upstream | 681927 | 59761804 ~ 59775363 (-) |
| G1394673 | NA | non-coding | downstream | 42438 | 58945943 ~ 58998411 (-) |
| G1394696 | LOC106566609 | non-coding | downstream | 52050 | 58982821 ~ 58988799 (-) |
| G1394670 | NA | non-coding | downstream | 105652 | 58933041 ~ 58935197 (-) |
| G1394656 | NA | non-coding | downstream | 136276 | 58904325 ~ 58904573 (-) |
| G1394777 | NA | non-coding | upstream | 33577 | 59113454 ~ 59113981 (-) |
| G1394778 | NA | non-coding | upstream | 34217 | 59114094 ~ 59114533 (-) |
| G1394806 | NA | non-coding | upstream | 57084 | 59136961 ~ 59137258 (-) |
| G1394807 | NA | non-coding | upstream | 58181 | 59138058 ~ 59138329 (-) |
| G1394809 | NA | non-coding | upstream | 61937 | 59141814 ~ 59142036 (-) |
| G1394341 | NA | other | downstream | 293550 | 58746870 ~ 58747299 (-) |
| G1394067 | NA | other | downstream | 612736 | 58424458 ~ 58428113 (-) |
| LOC110492410 | LOC106566756 | other | downstream | 734208 | 58302511 ~ 58315644 (-) |
| G1393997 | LOC106566752 | other | downstream | 762422 | 58274028 ~ 58278427 (-) |
| G1394768 | LOC106566610 | other | upstream | 31495 | 59111372 ~ 59112897 (-) |
| G1394978 | LOC106566621 | other | upstream | 274323 | 59354200 ~ 59356849 (-) |
| G1396467 | NA | other | upstream | 1474879 | 60554756 ~ 60582035 (-) |
| LOC118939463 | NA | other | upstream | 1581679 | 60661556 ~ 60672085 (-) |
| G1396543 | NA | other | upstream | 1613732 | 60693609 ~ 60694036 (-) |
