XLOC_032946


Basic Information

Item Value
gene id XLOC_032946
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 32687002 ~ 32687386 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00064748
CAAAAatatcttttcattttttttgtatttatagttATTATGTGTGTAGAAATGTGTGCAAAGGATCTGCAGTTCAAGAAAAGGACATGACGAGGAGTCCATTAATTCTTTATGTGTCCAGGATGCCTGGAAGAGACCTGTATATGAACACTTCACATGCAGACTCAACCTGACTGATAAAGTTGGTAAGTATCTTTGCTTCTTTTCTCTGCTGTTGTGTCTTAGTCTCAAATAACTTTCACAC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00064748 True 244 lncRNA 0.36 2 32687002 32687386

Neighbor

gene id symbol gene type direction distance location
XLOC_032945 LO017955.2 coding downstream 94210 32573996 ~ 32592792 (-)
XLOC_032944 NA coding downstream 270249 32415076 ~ 32416753 (-)
XLOC_032943 usp1 coding downstream 275275 32394502 ~ 32411727 (-)
XLOC_032942 angptl3 coding downstream 337849 32344197 ~ 32349153 (-)
XLOC_032941 atg4c coding downstream 371508 32300018 ~ 32315494 (-)
XLOC_032947 mafaa coding upstream 11973 32699359 ~ 32703317 (-)
XLOC_032948 zc3h3 coding upstream 30052 32717438 ~ 32834385 (-)
XLOC_032949 adcyap1r1a coding upstream 279364 32966750 ~ 33023745 (-)
XLOC_032950 si:dkey-170g13.2 coding upstream 383380 33070766 ~ 33075576 (-)
XLOC_032951 tspan1 coding upstream 417158 33104544 ~ 33129312 (-)
XLOC_032940 NA non-coding downstream 490177 32195808 ~ 32196825 (-)
XLOC_032933 NA non-coding downstream 937218 31745291 ~ 31749784 (-)
XLOC_032927 CR847887.1 non-coding downstream 1539747 31069530 ~ 31147255 (-)
XLOC_032952 NA non-coding upstream 503196 33190582 ~ 33210388 (-)
XLOC_032953 CR933860.1 non-coding upstream 755948 33443334 ~ 33443455 (-)
XLOC_032955 CR855206.1 non-coding upstream 1038661 33726047 ~ 33726148 (-)
XLOC_032962 NA non-coding upstream 1471231 34158617 ~ 34177898 (-)
XLOC_032964 CR385041.1 non-coding upstream 1956867 34644253 ~ 34644370 (-)

Expression


Co-expression Network