G1394799


Basic Information

Item Value
gene id G1394799
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 59182069 ~ 59182703 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1592788
TATTATTGTAGTATTGTACATTTTATATTGTACATTTGTTATAATAGATAAATAATGTAGTCATGTCTTGTATGATGTATAGTTTTAATTATGATGTAGgctgttgttttgttgtgatgcAATTGTTTTATtcttgtttggaccccaggaagagtagctgctgccttggctaatgggagTTCTATTAAATACTCAATGCCTgggccagacacacacagccagagacaCAGGCAGGGTTTCTCACAACGTTTAACATCTTCTAatctgccccccacacacacatgcacgtgcacaccacaggaggttggtggcaccttaattggggaggatgggctcgtggtaatggttggatcggaataggtggaatggtatcaaatacatggtttccagtaggttgataccattccattagctccgttccagacattactatgagccgtcctcccctcagcagcctcctgtggtacaCAAGCACATAACATTATCAGAACATCTACATCCACTACACACATATTCATAGATACCATTAACCATGCCCCTCTGTAAAATAATAGACGTAGCTCTTTCCAGCAGTCAAATGATcaaatcgccctctagtggtCTCCTGGGTGGAac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1592788 True 615 lncRNA 0.42 2 59182069 59182703

Neighbor

gene id symbol gene type direction distance location
LOC118939564 NA coding downstream 155943 59019837 ~ 59051938 (-)
LOC110492420 NA coding downstream 285104 58886676 ~ 58896965 (-)
LOC118939563 cf105 coding downstream 304567 58871749 ~ 58877502 (-)
LOC110492419 LOC106566607 coding downstream 311278 58865549 ~ 58870791 (-)
LOC110491124 LOC106566606 coding downstream 335012 58836641 ~ 58847057 (-)
plxnd1 LOC106566625 coding upstream 231309 59413470 ~ 59538798 (-)
LOC110492431 LOC106566626 coding upstream 358684 59541387 ~ 59640728 (-)
mrps25 mrps25 coding upstream 562673 59745376 ~ 59752581 (-)
nr2c2 nr2c2 coding upstream 579101 59761804 ~ 59775363 (-)
wdr46 wdr46 coding upstream 605861 59788564 ~ 59795744 (-)
G1394801 LOC106566613 non-coding downstream 23116 59157216 ~ 59158953 (-)
G1394809 NA non-coding downstream 40033 59141814 ~ 59142036 (-)
G1394807 NA non-coding downstream 43740 59138058 ~ 59138329 (-)
G1394806 NA non-coding downstream 44811 59136961 ~ 59137258 (-)
G1394778 NA non-coding downstream 67536 59114094 ~ 59114533 (-)
G1394989 brpf1 non-coding upstream 103540 59286243 ~ 59286979 (-)
G1394937 NA non-coding upstream 110405 59293108 ~ 59293331 (-)
G1394993 NA non-coding upstream 112112 59294815 ~ 59295121 (-)
G1394997 NA non-coding upstream 119648 59302351 ~ 59302792 (-)
G1394999 LOC100136012 non-coding upstream 122752 59305455 ~ 59305754 (-)
G1394768 LOC106566610 other downstream 69172 59111372 ~ 59112897 (-)
G1394341 NA other downstream 434770 58746870 ~ 58747299 (-)
G1394067 NA other downstream 753956 58424458 ~ 58428113 (-)
LOC110492410 LOC106566756 other downstream 875428 58302511 ~ 58315644 (-)
G1394978 LOC106566621 other upstream 171497 59354200 ~ 59356849 (-)
G1396467 NA other upstream 1372053 60554756 ~ 60582035 (-)
LOC118939463 NA other upstream 1478853 60661556 ~ 60672085 (-)
G1396543 NA other upstream 1510906 60693609 ~ 60694036 (-)
abhd6b LOC106566659 other upstream 1570402 60753006 ~ 60758788 (-)

Expression


Co-expression Network