G1395262


Basic Information

Item Value
gene id G1395262
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 59476468 ~ 59477513 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1593363
ATCCTACTGCTTCCCTCTGGTCCCAATACTGTATGATGACATGAGGCTTGATTACAGCTATGAGGTGATAAAACAAACATCCAGTCAGCTCGTTGATCCCCTCTGTGGTTAACTGCATCTGGAACAGGGGGCTATGAAGTCCCCCTCCACTGGGTTTAGTcaacactgtacagtactgagtatAGACATTATTACTCCACTGGGTTTAGTcaacactgtacagtactgagtatAGACATTATTACTCCACTGGGTTTAGTcaacactgtacagtactgagcaTAGACATTATTACTCCACTGGGTTTAGTcaacactgtacagtactgagtatAGACATTATTACTCCACTGGGTTTAGTCAACACTATACAGTACTGAGTATAGACATTATTACTCCACTGGGTTTAGTCAACACTATACAGTACTGAGTATAGACATTATTACTCCACTGGGTTTAGTcaacactgtacagtactgagcaTAGACATTATTACTCCACTGGGTTTAGTcaacactgtacagtactgagcaTAGACATTATTACAAAACCTCTAAGGATCTCTATTTTATTGTCTGTTTagctttgttaaaaaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1593363 True 596 lncRNA 0.40 2 59476468 59477513

Neighbor

gene id symbol gene type direction distance location
LOC110492425 LOC106566615 coding downstream 270324 59175934 ~ 59206144 (-)
LOC118939564 NA coding downstream 450342 59019837 ~ 59051938 (-)
LOC110492420 NA coding downstream 579503 58886676 ~ 58896965 (-)
LOC118939563 cf105 coding downstream 598966 58871749 ~ 58877502 (-)
LOC110492419 LOC106566607 coding downstream 605677 58865549 ~ 58870791 (-)
LOC110492431 LOC106566626 coding upstream 63874 59541387 ~ 59640728 (-)
mrps25 mrps25 coding upstream 267863 59745376 ~ 59752581 (-)
nr2c2 nr2c2 coding upstream 284291 59761804 ~ 59775363 (-)
wdr46 wdr46 coding upstream 311051 59788564 ~ 59795744 (-)
LOC110492442 LOC106566634 coding upstream 384953 59862466 ~ 59867536 (-)
G1395255 NA non-coding downstream 18667 59456995 ~ 59457801 (-)
plxnd1 LOC106566625 non-coding downstream 62142 59413470 ~ 59538798 (-)
G1395053 ift122 non-coding downstream 72161 59399488 ~ 59404307 (-)
G1395015 NA non-coding downstream 143352 59331057 ~ 59333116 (-)
G1394999 LOC100136012 non-coding downstream 170714 59305455 ~ 59305754 (-)
G1395330 NA non-coding upstream 120782 59598295 ~ 59601453 (-)
G1395340 NA non-coding upstream 164707 59642220 ~ 59642533 (-)
G1395342 NA non-coding upstream 166082 59643595 ~ 59643821 (-)
G1395354 NA non-coding upstream 183339 59660852 ~ 59661061 (-)
G1395375 NA non-coding upstream 202657 59680170 ~ 59680370 (-)
G1394978 LOC106566621 other downstream 119619 59354200 ~ 59356849 (-)
G1394768 LOC106566610 other downstream 363571 59111372 ~ 59112897 (-)
LOC110491124 LOC106566606 other downstream 629452 58836641 ~ 58847057 (-)
G1394341 NA other downstream 729169 58746870 ~ 58747299 (-)
G1394067 NA other downstream 1048355 58424458 ~ 58428113 (-)
G1396467 NA other upstream 1077243 60554756 ~ 60582035 (-)
LOC118939463 NA other upstream 1184043 60661556 ~ 60672085 (-)
G1396543 NA other upstream 1216096 60693609 ~ 60694036 (-)
abhd6b LOC106566659 other upstream 1275592 60753006 ~ 60758788 (-)
G1398619 NA other upstream 3257230 62734743 ~ 62735569 (-)

Expression


Co-expression Network