Gene
RNA
| Item | Value |
|---|---|
| gene id | G1395384 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 59686466 ~ 59686900 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1593498 | True | 435 | lncRNA | 0.37 | 1 | 59686466 | 59686900 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492431 | LOC106566626 | coding | downstream | 45738 | 59541387 ~ 59640728 (-) |
| plxnd1 | LOC106566625 | coding | downstream | 147668 | 59413470 ~ 59538798 (-) |
| LOC110492425 | LOC106566615 | coding | downstream | 480322 | 59175934 ~ 59206144 (-) |
| LOC118939564 | NA | coding | downstream | 660340 | 59019837 ~ 59051938 (-) |
| LOC110492420 | NA | coding | downstream | 789501 | 58886676 ~ 58896965 (-) |
| mrps25 | mrps25 | coding | upstream | 58476 | 59745376 ~ 59752581 (-) |
| nr2c2 | nr2c2 | coding | upstream | 74904 | 59761804 ~ 59775363 (-) |
| wdr46 | wdr46 | coding | upstream | 101664 | 59788564 ~ 59795744 (-) |
| LOC110492442 | LOC106566634 | coding | upstream | 175566 | 59862466 ~ 59867536 (-) |
| LOC110492455 | LOC106566637 | coding | upstream | 194232 | 59881132 ~ 59911772 (-) |
| G1395378 | NA | non-coding | downstream | 4624 | 59681479 ~ 59681842 (-) |
| G1395375 | NA | non-coding | downstream | 6096 | 59680170 ~ 59680370 (-) |
| G1395354 | NA | non-coding | downstream | 25405 | 59660852 ~ 59661061 (-) |
| G1395342 | NA | non-coding | downstream | 42645 | 59643595 ~ 59643821 (-) |
| G1395340 | NA | non-coding | downstream | 43933 | 59642220 ~ 59642533 (-) |
| G1395394 | NA | non-coding | upstream | 7161 | 59694061 ~ 59694653 (-) |
| G1395403 | NA | non-coding | upstream | 12579 | 59699479 ~ 59699731 (-) |
| G1395408 | NA | non-coding | upstream | 17364 | 59704264 ~ 59704481 (-) |
| G1395456 | NA | non-coding | upstream | 43142 | 59730042 ~ 59730278 (-) |
| G1395635 | NA | non-coding | upstream | 131933 | 59818833 ~ 59820458 (-) |
| G1394978 | LOC106566621 | other | downstream | 329617 | 59354200 ~ 59356849 (-) |
| G1394768 | LOC106566610 | other | downstream | 573569 | 59111372 ~ 59112897 (-) |
| LOC110491124 | LOC106566606 | other | downstream | 839450 | 58836641 ~ 58847057 (-) |
| G1394341 | NA | other | downstream | 939167 | 58746870 ~ 58747299 (-) |
| G1394067 | NA | other | downstream | 1258353 | 58424458 ~ 58428113 (-) |
| G1396467 | NA | other | upstream | 867856 | 60554756 ~ 60582035 (-) |
| LOC118939463 | NA | other | upstream | 974656 | 60661556 ~ 60672085 (-) |
| G1396543 | NA | other | upstream | 1006709 | 60693609 ~ 60694036 (-) |
| abhd6b | LOC106566659 | other | upstream | 1066205 | 60753006 ~ 60758788 (-) |
| G1398619 | NA | other | upstream | 3047843 | 62734743 ~ 62735569 (-) |
