Gene
RNA
| Item | Value |
|---|---|
| gene id | G1395693 |
| gene name | LOC106566639 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 59936542 ~ 59936892 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: glutamine-rich protein 1-like isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1593841 | True | 224 | lncRNA | 0.55 | 2 | 59936542 | 59936892 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ogg1 | ogg1 | coding | downstream | 11057 | 59916200 ~ 59925485 (-) |
| LOC110492455 | LOC106566637 | coding | downstream | 24770 | 59881132 ~ 59911772 (-) |
| LOC110492442 | LOC106566634 | coding | downstream | 69006 | 59862466 ~ 59867536 (-) |
| wdr46 | wdr46 | coding | downstream | 140798 | 59788564 ~ 59795744 (-) |
| nr2c2 | nr2c2 | coding | downstream | 161179 | 59761804 ~ 59775363 (-) |
| LOC110492460 | LOC106566640 | coding | upstream | 4813 | 59941705 ~ 59946884 (-) |
| LOC110492462 | NA | coding | upstream | 22269 | 59959161 ~ 59961425 (-) |
| LOC110491132 | LOC106566643 | coding | upstream | 46388 | 59983280 ~ 60049509 (-) |
| LOC110492464 | NA | coding | upstream | 197360 | 60134252 ~ 60137371 (-) |
| LOC110491133 | LOC106566645 | coding | upstream | 202237 | 60139129 ~ 60343362 (-) |
| G1395691 | NA | non-coding | downstream | 3405 | 59932872 ~ 59933137 (-) |
| G1395638 | qars | non-coding | downstream | 7345 | 59903524 ~ 59929197 (-) |
| G1395667 | NA | non-coding | downstream | 57816 | 59854928 ~ 59878726 (-) |
| G1395659 | NA | non-coding | downstream | 91764 | 59844302 ~ 59844778 (-) |
| G1395657 | NA | non-coding | downstream | 111516 | 59823630 ~ 59825026 (-) |
| G1395699 | NA | non-coding | upstream | 24731 | 59961623 ~ 59961886 (-) |
| G1395751 | NA | non-coding | upstream | 119292 | 60056184 ~ 60056538 (-) |
| G1395977 | NA | non-coding | upstream | 135528 | 60072420 ~ 60132053 (-) |
| G1394978 | LOC106566621 | other | downstream | 579693 | 59354200 ~ 59356849 (-) |
| G1394768 | LOC106566610 | other | downstream | 823645 | 59111372 ~ 59112897 (-) |
| LOC110491124 | LOC106566606 | other | downstream | 1089526 | 58836641 ~ 58847057 (-) |
| G1394341 | NA | other | downstream | 1189243 | 58746870 ~ 58747299 (-) |
| G1394067 | NA | other | downstream | 1508429 | 58424458 ~ 58428113 (-) |
| G1396467 | NA | other | upstream | 617864 | 60554756 ~ 60582035 (-) |
| LOC118939463 | NA | other | upstream | 724664 | 60661556 ~ 60672085 (-) |
| G1396543 | NA | other | upstream | 756717 | 60693609 ~ 60694036 (-) |
| abhd6b | LOC106566659 | other | upstream | 816213 | 60753006 ~ 60758788 (-) |
| G1398619 | NA | other | upstream | 2797851 | 62734743 ~ 62735569 (-) |
