Gene
RNA
| Item | Value |
|---|---|
| gene id | G1396467 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 60554756 ~ 60582035 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: solute carrier family 12 member 5-like isoform X1 |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1594716 | False | 663 | TUCP | 0.49 | 3 | 60554756 | 60582035 |
| TU1594714 | True | 692 | TUCP | 0.46 | 2 | 60557038 | 60582035 |
60,544,000
60,548,000
60,552,000
60,556,000
60,560,000
60,564,000
60,568,000
60,572,000
60,576,000
60,580,000
60,584,000
60,588,000
60,592,000
60,596,000
60,600,000
NC_048580.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492466 | LOC106566648 | coding | downstream | 99547 | 60431333 ~ 60455209 (-) |
| LOC110491135 | NA | coding | downstream | 130098 | 60423345 ~ 60424658 (-) |
| LOC110491133 | LOC106566645 | coding | downstream | 211394 | 60139129 ~ 60343362 (-) |
| LOC110492464 | NA | coding | downstream | 417385 | 60134252 ~ 60137371 (-) |
| LOC110491132 | LOC106566643 | coding | downstream | 505247 | 59983280 ~ 60049509 (-) |
| pabpc1l | LOC106566651 | coding | upstream | 63677 | 60645712 ~ 60652804 (-) |
| LOC100136193 | LOC100136193 | coding | upstream | 71593 | 60653628 ~ 60657344 (-) |
| LOC118939463 | NA | coding | upstream | 79879 | 60661556 ~ 60672085 (-) |
| LOC110492474 | smim4 | coding | upstream | 100127 | 60680449 ~ 60683566 (-) |
| LOC110492475 | LOC106566658 | coding | upstream | 108233 | 60689293 ~ 60743762 (-) |
| G1396379 | NA | non-coding | downstream | 135677 | 60418185 ~ 60419079 (-) |
| G1396370 | NA | non-coding | downstream | 154004 | 60400468 ~ 60400752 (-) |
| G1396124 | NA | non-coding | downstream | 249921 | 60304129 ~ 60304835 (-) |
| G1396039 | NA | non-coding | downstream | 375418 | 60178865 ~ 60179338 (-) |
| G1396525 | NA | non-coding | upstream | 41523 | 60623558 ~ 60624027 (-) |
| G1396526 | NA | non-coding | upstream | 43079 | 60625114 ~ 60625447 (-) |
| G1396527 | NA | non-coding | upstream | 43680 | 60625715 ~ 60625943 (-) |
| G1396533 | NA | non-coding | upstream | 85832 | 60667867 ~ 60668144 (-) |
| G1394978 | LOC106566621 | other | downstream | 1197907 | 59354200 ~ 59356849 (-) |
| G1394768 | LOC106566610 | other | downstream | 1441859 | 59111372 ~ 59112897 (-) |
| LOC110491124 | LOC106566606 | other | downstream | 1707740 | 58836641 ~ 58847057 (-) |
| G1394341 | NA | other | downstream | 1807457 | 58746870 ~ 58747299 (-) |
| G1394067 | NA | other | downstream | 2126643 | 58424458 ~ 58428113 (-) |
| G1396543 | NA | other | upstream | 111574 | 60693609 ~ 60694036 (-) |
| abhd6b | LOC106566659 | other | upstream | 171070 | 60753006 ~ 60758788 (-) |
| G1398619 | NA | other | upstream | 2152708 | 62734743 ~ 62735569 (-) |
| G1399235 | NA | other | upstream | 2617084 | 63199119 ~ 63292201 (-) |
