G1398041



Basic Information


Item Value
gene id G1398041
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 61619833 ~ 61620260 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1596545
CAGACAGCAGGTTGTTTGAAGAGGCGCAGCCAGTGTCTCCTGGACAGTTTGGACTGGGGCCCTCCACTACCCAGTGACTCCAATGTGATGATAGGACCtggaacaaacaaacagacagacagagcaagagagaaagaaagagagagcgagagagacgcaaagagagagcgagaaagaggcaATTCTGAGCTCAATGTGGTGCTTAGAGGTAGTTCATAACAGCGATAAGGTCAGATGGCTAACCCTGTACATAGCATCTttattcattgtgtatttattccatgtgttatgatttttttctatatttttctcaggcattgttgggaagggcccatatgCATTTCAGTGTTGTTCTACatatgttgtttacaaagcatgtgacaaatataattagaTTTGAGTGACATCAAATATCACTACTTGCAGAA

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1596545 True 428 lncRNA 0.42 1 61619833 61620260

Neighbor


gene id symbol gene type direction distance location
LOC110492509 LOC106566095 coding downstream 18410 61595093 ~ 61601423 (-)
dnah12 dnah12 coding downstream 25012 61558700 ~ 61594821 (-)
asb14b LOC106566601 coding downstream 61411 61552330 ~ 61558422 (-)
LOC110492491 LOC106566602 coding downstream 68079 61525712 ~ 61551754 (-)
LOC110491138 LOC106571845 coding downstream 163367 61329341 ~ 61456466 (-)
LOC110492507 LOC106566595 coding upstream 66987 61687247 ~ 61689079 (-)
LOC110492496 LOC106566592 coding upstream 158858 61779118 ~ 61796715 (-)
LOC110492510 LOC106566591 coding upstream 194284 61814544 ~ 61943821 (-)
LOC110529871 zbtb46 coding upstream 560969 62181229 ~ 62311208 (-)
uckl1b uckl1 coding upstream 708528 62328788 ~ 62386980 (-)
G1398036 NA non-coding downstream 5393 61614238 ~ 61614440 (-)
G1398035 NA non-coding downstream 7429 61612171 ~ 61612404 (-)
G1398033 NA non-coding downstream 13480 61606009 ~ 61606353 (-)
G1398030 NA non-coding downstream 15671 61603946 ~ 61604162 (-)
G1397992 NA non-coding downstream 111970 61492168 ~ 61507863 (-)
G1398042 NA non-coding upstream 754 61621014 ~ 61621808 (-)
G1398043 NA non-coding upstream 2030 61622290 ~ 61622855 (-)
G1398044 NA non-coding upstream 3295 61623555 ~ 61623838 (-)
G1398045 NA non-coding upstream 7362 61627622 ~ 61629679 (-)
G1398047 NA non-coding upstream 17443 61637703 ~ 61639384 (-)
abhd6b LOC106566659 other downstream 864962 60753006 ~ 60758788 (-)
G1396543 NA other downstream 925797 60693609 ~ 60694036 (-)
LOC118939463 NA other downstream 956317 60661556 ~ 60672085 (-)
G1396467 NA other downstream 1037798 60554756 ~ 60582035 (-)
G1394978 LOC106566621 other downstream 2262984 59354200 ~ 59356849 (-)
G1398619 NA other upstream 1114483 62734743 ~ 62735569 (-)
G1399235 NA other upstream 1578859 63199119 ~ 63292201 (-)
G1399367 NA other upstream 1764589 63384849 ~ 63385262 (-)
G1400503 zhx3 other upstream 2483110 64103370 ~ 64105039 (-)
G1400552 NA other upstream 2636666 64256926 ~ 64257433 (-)

Expression



Co-expression Network