Gene
RNA
| Item | Value |
|---|---|
| gene id | G1398133 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 61813884 ~ 61814480 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1596650 | False | 217 | lncRNA | 0.35 | 2 | 61813884 | 61814480 |
| TU1596651 | True | 229 | lncRNA | 0.36 | 2 | 61814216 | 61814480 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492496 | LOC106566592 | coding | downstream | 17169 | 61779118 ~ 61796715 (-) |
| LOC110492507 | LOC106566595 | coding | downstream | 124805 | 61687247 ~ 61689079 (-) |
| LOC110492509 | LOC106566095 | coding | downstream | 212461 | 61595093 ~ 61601423 (-) |
| dnah12 | dnah12 | coding | downstream | 219063 | 61558700 ~ 61594821 (-) |
| asb14b | LOC106566601 | coding | downstream | 255462 | 61552330 ~ 61558422 (-) |
| LOC110492510 | LOC106566591 | coding | upstream | 64 | 61814544 ~ 61943821 (-) |
| LOC110529871 | zbtb46 | coding | upstream | 366749 | 62181229 ~ 62311208 (-) |
| uckl1b | uckl1 | coding | upstream | 514308 | 62328788 ~ 62386980 (-) |
| LOC118939568 | NA | coding | upstream | 527886 | 62342366 ~ 62347109 (-) |
| LOC110492495 | znf512b | coding | upstream | 572948 | 62387428 ~ 62459484 (-) |
| G1398132 | NA | non-coding | downstream | 1431 | 61808397 ~ 61812453 (-) |
| G1398126 | NA | non-coding | downstream | 14147 | 61799318 ~ 61799737 (-) |
| G1398120 | NA | non-coding | downstream | 35782 | 61773041 ~ 61778102 (-) |
| G1398118 | NA | non-coding | downstream | 50647 | 61762525 ~ 61763237 (-) |
| G1398116 | NA | non-coding | downstream | 55994 | 61755971 ~ 61757890 (-) |
| G1398142 | NA | non-coding | upstream | 14000 | 61828480 ~ 61828761 (-) |
| G1398185 | NA | non-coding | upstream | 98722 | 61913202 ~ 61913587 (-) |
| G1398231 | NA | non-coding | upstream | 167198 | 61981678 ~ 61981894 (-) |
| G1398243 | NA | non-coding | upstream | 187531 | 62002011 ~ 62002243 (-) |
| G1398250 | NA | non-coding | upstream | 195989 | 62010469 ~ 62010714 (-) |
| abhd6b | LOC106566659 | other | downstream | 1059013 | 60753006 ~ 60758788 (-) |
| G1396543 | NA | other | downstream | 1119848 | 60693609 ~ 60694036 (-) |
| LOC118939463 | NA | other | downstream | 1150368 | 60661556 ~ 60672085 (-) |
| G1396467 | NA | other | downstream | 1231849 | 60554756 ~ 60582035 (-) |
| G1394978 | LOC106566621 | other | downstream | 2457035 | 59354200 ~ 59356849 (-) |
| G1398619 | NA | other | upstream | 920263 | 62734743 ~ 62735569 (-) |
| G1399235 | NA | other | upstream | 1384639 | 63199119 ~ 63292201 (-) |
| G1399367 | NA | other | upstream | 1570369 | 63384849 ~ 63385262 (-) |
| G1400503 | zhx3 | other | upstream | 2288890 | 64103370 ~ 64105039 (-) |
| G1400552 | NA | other | upstream | 2442446 | 64256926 ~ 64257433 (-) |
