XLOC_032966


Basic Information

Item Value
gene id XLOC_032966
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 34817183 ~ 34818189 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00064749
tcagctaaactctcccactctatttttttcttttgttgttaattccggagaacaaacttgcaaataacaccgcttttctccggtctacctccgaaagcacccagccggcacacgaccgaccttcaacgttgaaatatggttgaaataaggtcagatgtgttttgaacgttgaaataatgttgatagaacgtttaatgttgaatggttgaaaaacagcctgcatatgacaaggcttcaacgttgaaatgtggttgaaaatacgtcagttgttgctttaatgttgaaacaatgttgaatgataaatggttgaaaaaagttacagaaatccttgtacaaatcaacgttgacattttttttatcatgatctgtatgttgaattaacgtcatggcttcacccaatattcaacatgtttggttaccatggtatcggaggactcggcgcacgcggccacgcgcagcgcttcacttcacttaattacgaacacctgacctgcagtgcagcagaattcagagacatgtaacttaacgtactccagagacgcactaacttgcacagcattgaatggaaaaggctttgtccatgtaagtttactttacctttaactaAGCTAGCctatctgttaaatcttcttgttgctttggttggtgatatt

Function

GO:

id name namespace
GO:0050953 sensory perception of light stimulus biological_process
GO:0007601 visual perception biological_process

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00064749 True 653 lncRNA 0.40 2 34817183 34818189

Neighbor

gene id symbol gene type direction distance location
XLOC_032965 NA coding downstream 165044 34649795 ~ 34652139 (-)
XLOC_032964 CR385041.1 coding downstream 172813 34644253 ~ 34644370 (-)
XLOC_032963 dmrt2b coding downstream 596542 34213971 ~ 34220641 (-)
XLOC_032962 NA coding downstream 639285 34158617 ~ 34177898 (-)
XLOC_032961 fam183a coding downstream 675248 34138386 ~ 34141935 (-)
XLOC_032967 mier1a coding upstream 5532 34823721 ~ 34838413 (-)
XLOC_032968 slc35d1a coding upstream 29087 34847276 ~ 34860590 (-)
XLOC_032969 serbp1a coding upstream 113408 34931597 ~ 34938746 (-)
XLOC_032970 hsd17b7 coding upstream 125162 34943351 ~ 34958274 (-)
XLOC_032971 ddr2a coding upstream 141836 34960025 ~ 35032792 (-)
XLOC_032955 CR855206.1 non-coding downstream 1091035 33726047 ~ 33726148 (-)
XLOC_032953 CR933860.1 non-coding downstream 1373728 33443334 ~ 33443455 (-)
XLOC_032973 NA non-coding upstream 266843 35085032 ~ 35090195 (-)
XLOC_032979 NA non-coding upstream 930877 35749066 ~ 35749921 (-)
XLOC_032980 CU137680.2 non-coding upstream 1092309 35910498 ~ 35914713 (-)
XLOC_032981 NA non-coding upstream 1303130 36121319 ~ 36124890 (-)
XLOC_032983 BX936433.2 non-coding upstream 1469349 36287538 ~ 36290625 (-)

Expression


Co-expression Network