XLOC_032973


Basic Information

Item Value
gene id XLOC_032973
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 35085032 ~ 35090195 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00065190
GTAAAAGAAAAGTACACCGCGACCACGTAGTTTTATTTTACTACGTTACTTCTATATCTCTTTTGTGGAATTGTTTCACCAATCTTGAATTTTGGCTCTGCAAAGAACAACACCGTAGAGTGAGCTACTAAGCAAACTGACCATGACAGAAAAGATGTCAATGGAGACAGCTCCCGTTCTTCTGTTTGCCCAGAGAAGAGCCAGAAAGCTGTTTGTGTGGAGAGACTCTGCAGGCTCTGCAGCGCTGGAGAACAGAGATGGGTTTGTTATTGTGTTACTGTGGTGACAGAAGGTCAGCTCTCTGTCTTTTGCAGACATACTTGAGAAAAAAATCCCAGGCAAATGCAGCATTTCTGAAatacaacaattacaaaaaaagcaatgtaaaaatagctgcaatgttattttttatgatttgaaTTGTCCAGCAACAATTGCTTAATTCCTGTGATTGAGGATGAAAG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00065190 True 464 lncRNA 0.40 2 35085032 35090195

Neighbor

gene id symbol gene type direction distance location
XLOC_032972 uap1 coding downstream 32644 35033457 ~ 35052388 (-)
XLOC_032971 ddr2a coding downstream 52240 34960025 ~ 35032792 (-)
XLOC_032970 hsd17b7 coding downstream 126758 34943351 ~ 34958274 (-)
XLOC_032969 serbp1a coding downstream 146286 34931597 ~ 34938746 (-)
XLOC_032968 slc35d1a coding downstream 224442 34847276 ~ 34860590 (-)
XLOC_032974 nos1apa coding upstream 9702 35099897 ~ 35310224 (-)
XLOC_032975 rgs5a coding upstream 297172 35387367 ~ 35439406 (-)
XLOC_032976 rgs16 coding upstream 353235 35443430 ~ 35446110 (-)
XLOC_032977 rgs8 coding upstream 369174 35459369 ~ 35488180 (-)
XLOC_032978 brinp3a.1 coding upstream 585589 35675784 ~ 35779348 (-)
XLOC_032966 NA non-coding downstream 266843 34817183 ~ 34818189 (-)
XLOC_032965 NA non-coding downstream 432893 34649795 ~ 34652139 (-)
XLOC_032964 CR385041.1 non-coding downstream 440662 34644253 ~ 34644370 (-)
XLOC_032962 NA non-coding downstream 907134 34158617 ~ 34177898 (-)
XLOC_032955 CR855206.1 non-coding downstream 1358884 33726047 ~ 33726148 (-)
XLOC_032979 NA non-coding upstream 658871 35749066 ~ 35749921 (-)
XLOC_032980 CU137680.2 non-coding upstream 820303 35910498 ~ 35914713 (-)
XLOC_032981 NA non-coding upstream 1031124 36121319 ~ 36124890 (-)
XLOC_032983 BX936433.2 non-coding upstream 1197343 36287538 ~ 36290625 (-)
XLOC_032984 NA non-coding upstream 1296097 36386292 ~ 36393495 (-)

Expression


Co-expression Network