G1399179


Basic Information

Item Value
gene id G1399179
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 63122786 ~ 63124114 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1597833
GATGGGAGGTGAAGGAACACTTTAGCCATGGTCATGATACTATCTCTGTAGTCAACTCAAATTACACAAACTACTACTAGTGTAGTACCTGTACTagagtgtgtgtagcagtgtagTAATTGTATTAGTGTAGAACTTGTAGTAGTGggtgtgtagtagtggtgtgtagtacttgtagtagtgggtgtgtagtagtgtagtacttgtagtagtgggtgtgtagtagtgtagtacttgtagtagtgggtgtgtagtagtgtaatacttGTAGTAGGGTGGGTTTAGTAGTGTCATACTTGAAGTAATGGGTATGTAGTAGTGTACTTGTAGAAGtgggtgtgtagtagtgtagtacttGTAGTTGTGGGTGTGTAGTAGTGTCATACTTGAAGTAATGGGTATGTAGTAGTATACTTGTAGAAGtgggtgtgtagtagtgtagtacttGTAGTTGTGGGTGTGTAGTACTTGTAGTTGTGGTTGTGTAGTTGTTGGTGTGTAGTACATGTAGTAGTGGGTGAGTAATAGTGTTGTACTTGTCGTTGTgggtgtatagtagtgtagtacttGTAGTAGGGTAGTAGTGGGTGTGTAGTAGTGTCATACTTGTAGTCATGGGTGTGTAGTACTTGTAGTCATGGGTGTGTAATACCTGTAGTAGTGCAGTacttgtagtagtggtgtgtgtagtagtatagtacttgtagtagtgggtgtgtagtagtagtagtagtagtggaacacaatgtgtagtagtggtgtgtgtagtagtatagtacttgtagtagtgggtgtgtagtagtagtagtagtagtggaacacaatgtgtagtagtggtgtgtgtagtagtatagtacttgtagtagtgggtgtgtagtagtagtagtagtagtagtggaacacaatgtgtagtagtagtagtagtggcagtagtagtggtagtagtagtagtagtagtagtagtagtagtagtagtagtagtagtagtagtagtagtagtagtagtagtagtagtagaagtaatagTGGAACAcaatgtgtagtagtagtagtagtagtagtagtagtagtagtggaacacaatgtgtagtagtagtagtagtagtagtggaacacaatgtgtagtagtagtagtagtggaacacaatgtgtagtagtagtagtagtggaacacaatgtgtagtagtagtagtagtagtggaacacaatgtgtagtagtagtagtagtggaacacaatgtgtagtagtagtagt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1597833 True 1254 lncRNA 0.39 2 63122786 63124114

Neighbor

gene id symbol gene type direction distance location
b4galt5 LOC106566571 coding downstream 114287 62959965 ~ 63008499 (-)
LOC118939569 samd10 coding downstream 457280 62469950 ~ 62665506 (-)
LOC110492495 znf512b coding downstream 663302 62387428 ~ 62459484 (-)
uckl1b uckl1 coding downstream 735806 62328788 ~ 62386980 (-)
LOC110492520 LOC106566548 coding upstream 300797 63424911 ~ 63429527 (-)
LOC110492523 dhx35 coding upstream 940136 64064250 ~ 64081609 (-)
LOC118939600 NA coding upstream 942072 64066186 ~ 64066289 (-)
rab5if cssa13h20orf24 coding upstream 964070 64088184 ~ 64092123 (-)
plcg1 plcg1 coding upstream 983881 64107995 ~ 64145664 (-)
G1399151 NA non-coding downstream 45477 63077042 ~ 63077309 (-)
G1399149 NA non-coding downstream 46834 63075646 ~ 63075952 (-)
G1399148 NA non-coding downstream 48326 63074118 ~ 63074460 (-)
G1399141 NA non-coding downstream 59701 63062870 ~ 63063085 (-)
G1399130 NA non-coding downstream 90736 63031426 ~ 63032050 (-)
G1399290 NA non-coding upstream 146980 63271094 ~ 63272300 (-)
G1399296 NA non-coding upstream 151604 63275718 ~ 63276237 (-)
G1399311 NA non-coding upstream 178264 63302378 ~ 63304476 (-)
G1399307 NA non-coding upstream 230832 63354946 ~ 63355189 (-)
G1399356 NA non-coding upstream 247256 63371370 ~ 63371604 (-)
G1398619 NA other downstream 387217 62734743 ~ 62735569 (-)
abhd6b LOC106566659 other downstream 2367915 60753006 ~ 60758788 (-)
G1396543 NA other downstream 2428750 60693609 ~ 60694036 (-)
LOC118939463 NA other downstream 2459270 60661556 ~ 60672085 (-)
G1396467 NA other downstream 2540751 60554756 ~ 60582035 (-)
G1399235 NA other upstream 75005 63199119 ~ 63292201 (-)
G1399367 NA other upstream 260735 63384849 ~ 63385262 (-)
G1400503 zhx3 other upstream 979256 64103370 ~ 64105039 (-)
G1400552 NA other upstream 1132812 64256926 ~ 64257433 (-)
G1400564 LOC106597321 other upstream 1160093 64284207 ~ 64284547 (-)

Expression


Co-expression Network