XLOC_032979


Basic Information

Item Value
gene id XLOC_032979
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 35749066 ~ 35749921 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00064750
agtcaagctatttgTAGTTCCTAAAGCTTGTattggcgacaagacttttgtcgggtaGTGTAGTATAATAGCTGGTATGTGTAACTTAAAATAGATCAGTTGTCAAAACTAAagtataaattagtttttaagaCTATCATAACTATTCACATGTATGGTTAGTTGCGATTATCACTTCAGTGTTTGCGTTCAATGATATTGTTTCCCATCATTACAGTCTGACTCCCCAAATTATTAGTATTGTTTGCATACACTGTGCTACATGTTCAGCCATATGAACTGTAGTTTATAGTCTTTCTATTGCCATAATGAAGCCAACAAAGTATGAACAAAGAGTGcagataaaataaaaaggaaactGTTGAGCTAAATCTGATATTTGCAGACTGATGTCCACCAGACTCACCCCTTAGACTGTGCCATTCATCAAGCAACTACTACAATTCATTGTGCTGTGATATGCCATTTTCTATCAATGACCTGTACAATCCGTTCATTCCCCAGACAAATGCCACCAAGTCCTTTTAAGTCCACCTTATTCAAGCAAAAAGTCACGCCACAGCTAAGATGGGAAAATTGTGTTGCCTCTCGACCATGACAGAATCTAATATCAAGATGGATCTATTTTGAGGGCAGAACATCACACAAATAATGCATCTCTTCAgtggtttattaaaaaaaaaaaaaatgccattagCAAATGGCCTGAGTATTGCAATGACAGTACTCCCCCTTCTTTTaagtatttcatttaaaatatttatttattttccccaaCAATAGGTCGGCTTGTAATATCAAaaggttttatttaataatattgcttTCTATCGAATAACCTTTTTTTCAAGAGATC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00064750 True 856 lncRNA 0.35 1 35749066 35749921

Neighbor

gene id symbol gene type direction distance location
XLOC_032977 rgs8 coding downstream 260886 35459369 ~ 35488180 (-)
XLOC_032976 rgs16 coding downstream 302956 35443430 ~ 35446110 (-)
XLOC_032975 rgs5a coding downstream 309660 35387367 ~ 35439406 (-)
XLOC_032974 nos1apa coding downstream 438842 35099897 ~ 35310224 (-)
XLOC_032973 NA coding downstream 658871 35085032 ~ 35090195 (-)
XLOC_032980 CU137680.2 coding upstream 160577 35910498 ~ 35914713 (-)
XLOC_032981 NA coding upstream 371398 36121319 ~ 36124890 (-)
XLOC_032982 brinp3a.2 coding upstream 377584 36127505 ~ 36198052 (-)
XLOC_032983 BX936433.2 coding upstream 537617 36287538 ~ 36290625 (-)
XLOC_032984 NA coding upstream 636371 36386292 ~ 36393495 (-)
XLOC_032966 NA non-coding downstream 930877 34817183 ~ 34818189 (-)
XLOC_032965 NA non-coding downstream 1096927 34649795 ~ 34652139 (-)
XLOC_032964 CR385041.1 non-coding downstream 1104696 34644253 ~ 34644370 (-)
XLOC_032962 NA non-coding downstream 1571168 34158617 ~ 34177898 (-)
XLOC_032985 BX950188.3 non-coding upstream 729272 36479193 ~ 36502330 (-)

Expression


Co-expression Network