Gene
RNA
| Item | Value |
|---|---|
| gene id | G1399646 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 63651402 ~ 63651626 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| ORF2 protein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1598324 | True | 225 | lncRNA | 0.53 | 1 | 63651402 | 63651626 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492520 | LOC106566548 | coding | downstream | 221875 | 63424911 ~ 63429527 (-) |
| b4galt5 | LOC106566571 | coding | downstream | 642903 | 62959965 ~ 63008499 (-) |
| LOC118939569 | samd10 | coding | downstream | 985896 | 62469950 ~ 62665506 (-) |
| LOC110492495 | znf512b | coding | downstream | 1191918 | 62387428 ~ 62459484 (-) |
| LOC118939568 | NA | coding | downstream | 1304293 | 62342366 ~ 62347109 (-) |
| LOC110492523 | dhx35 | coding | upstream | 412624 | 64064250 ~ 64081609 (-) |
| LOC118939600 | NA | coding | upstream | 414560 | 64066186 ~ 64066289 (-) |
| rab5if | cssa13h20orf24 | coding | upstream | 436558 | 64088184 ~ 64092123 (-) |
| plcg1 | plcg1 | coding | upstream | 456369 | 64107995 ~ 64145664 (-) |
| LOC110492527 | top1 | coding | upstream | 497705 | 64149331 ~ 64179898 (-) |
| G1399625 | NA | non-coding | downstream | 12276 | 63638829 ~ 63639126 (-) |
| G1399624 | NA | non-coding | downstream | 12626 | 63638576 ~ 63638776 (-) |
| G1399623 | NA | non-coding | downstream | 13267 | 63637847 ~ 63638135 (-) |
| G1399605 | NA | non-coding | downstream | 27662 | 63623478 ~ 63623740 (-) |
| G1399603 | NA | non-coding | downstream | 28064 | 63623048 ~ 63623338 (-) |
| G1399674 | NA | non-coding | upstream | 18052 | 63669678 ~ 63669914 (-) |
| G1399679 | NA | non-coding | upstream | 22717 | 63674343 ~ 63674588 (-) |
| G1399682 | NA | non-coding | upstream | 24446 | 63676072 ~ 63676867 (-) |
| G1399685 | NA | non-coding | upstream | 26504 | 63678130 ~ 63678597 (-) |
| G1399691 | NA | non-coding | upstream | 31066 | 63682692 ~ 63682950 (-) |
| G1399367 | NA | other | downstream | 266140 | 63384849 ~ 63385262 (-) |
| G1399235 | NA | other | downstream | 359201 | 63199119 ~ 63292201 (-) |
| G1398619 | NA | other | downstream | 915833 | 62734743 ~ 62735569 (-) |
| abhd6b | LOC106566659 | other | downstream | 2896531 | 60753006 ~ 60758788 (-) |
| G1396543 | NA | other | downstream | 2957366 | 60693609 ~ 60694036 (-) |
| G1400503 | zhx3 | other | upstream | 451744 | 64103370 ~ 64105039 (-) |
| G1400552 | NA | other | upstream | 605300 | 64256926 ~ 64257433 (-) |
| G1400564 | LOC106597321 | other | upstream | 632581 | 64284207 ~ 64284547 (-) |
| G1400565 | LOC106575828 | other | upstream | 634002 | 64285628 ~ 64285993 (-) |
| G1400578 | NA | other | upstream | 658257 | 64309883 ~ 64310456 (-) |
