XLOC_032984


Basic Information

Item Value
gene id XLOC_032984
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 36386292 ~ 36393495 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00065193
CTTTTTTATATCATGAACCACTGGATTTATGTTGCATATATGTAAGTACAGATACATATTTTAATACAGTAAAATCATTAATGTACGTACATCATTTGTCTTCACAAGCATTGGAAATGTAACAGATTTCCACTTGTAAATCATAAAAGTTATCCTTCTTTATGAGCAATGTCTGtttaaatggcataaatgttttgaaGTCCACTACAAAGGAGTCTGAAGTGTGtataaactataatataaataCCATTGAAAgcaaaatcaacttttgcaaATAAAAATTTTAGAAAGACATTTTTAAGCATTAAAAATCATTCAAAGTGAACGATGAAATGTTGGAAATGACAAGGCATAGAGGAGAAAATTTGGAATAAAACACTGTCAGAAACTATGCTTTTCTAACTACAGTTAGAGTTTTAGTACAACACAAATTTGCAATGCTGTTTGCAAATTTTTAGAGAAACAATGGATTTATAAAACACAGAATTACTGAACTATGTCTCTAAAGATATAACTTACAAACTTAGTTGCCCAACAAAGGTTTTAGGAAACTTTCTCCAGGATAGGGAATGCATTACTTTCAAGCACTTTGCTGCTCTGACTTAAAAGACAGAGATCAAATTATAGCATTGAATTTGCATTATCACAAGGTTGTCAAAAGGGGAGGAATTATTACCTACTAACTAGATCCTTTGATCAGACTTGGGGCCAGATTTTATAATATCTTATCTGCACTATATTGCAAATTCtcttttgacaaaaaaataaaaaaataaaaaaaataaaaaactcagtATACACTAAGACACAGCACAAGGTCAAAAATGACTgatgaaaagcatttttttctcctTACTGACCCTGTTGCATATATTGTAGGAATTTTCCTTTCAGACATTATTTATGcaagtatttaaatgaataatgcaACTTGATTAATTTATAGTCGGCAGAATAGCCAGTTGTCTGACTGTCAGAAAATACAGACTGATggacggacgaacggacggacagacggacagacagacagacagacaaataaataaataagtaaaaaaataaataaacaataaaacagtgAAGACTCATGAATGCATTTATGAGAGCAAACTAGCAAACAATGCAGAAAACAAGTCAAGTAAGTACAAGTAAGTGTAAGGTACGACATGTTTTGAAAGTCTATTATTATTGCATGacattttagtttaaataaattattaaatcacaTTAGAGCTGTAATTTTGGAGTCTGTATCTATCAAATTCGAGGGCAGACATCAACACATAGTCTGCACGGAGCATTTCAGGCTTTTCATTAGAGTACCACTAAAAATGTTTCAACTCAAGGTCTACAGCTAAAATGGATGCCTCACTTGTTGCTTCCTTTTCCCTAGTTGCCACTTTTGTCAGTGCTTCTGTTGGGCAAAAATTCCATTTCTTTCAATGTTAGAAATGTGCATACTATAGCCGAGAACAATACCCGAACAGAATCCCACTATCAGAGAGCCGTAAGGTGTAAT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00065193 True 1519 lncRNA 0.32 2 36386292 36393495

Neighbor

gene id symbol gene type direction distance location
XLOC_032983 BX936433.2 coding downstream 95667 36287538 ~ 36290625 (-)
XLOC_032982 brinp3a.2 coding downstream 188240 36127505 ~ 36198052 (-)
XLOC_032981 NA coding downstream 261402 36121319 ~ 36124890 (-)
XLOC_032980 CU137680.2 coding downstream 471579 35910498 ~ 35914713 (-)
XLOC_032978 brinp3a.1 coding downstream 606944 35675784 ~ 35779348 (-)
XLOC_032985 BX950188.3 coding upstream 85698 36479193 ~ 36502330 (-)
XLOC_032986 her6 coding upstream 157588 36551083 ~ 36552844 (-)
XLOC_032987 NA coding upstream 227815 36621310 ~ 36628097 (-)
XLOC_032988 opa1 coding upstream 324490 36717985 ~ 36795219 (-)
XLOC_032989 CT033823.1 coding upstream 340214 36733709 ~ 36733826 (-)
XLOC_032979 NA non-coding downstream 636371 35749066 ~ 35749921 (-)
XLOC_032973 NA non-coding downstream 1296097 35085032 ~ 35090195 (-)
XLOC_032990 CT033823.3 non-coding upstream 350639 36744134 ~ 36744251 (-)
XLOC_032991 CT033823.2 non-coding upstream 376444 36769939 ~ 36770069 (-)

Expression


Co-expression Network