G1400564 (LOC106597321)



Basic Information


Item Value
gene id G1400564
gene name LOC106597321
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 64284207 ~ 64284547 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1599377
ccagaaatgcaagtttgaactgcttagtaatcccttcacagttgatgtggaaaatgcaccaaccaacatccaaatggagctgattgaactccagtgcaacgacacgctgaagtcaaagtatgatgctgtgggcgccgcacagtttccaaggttcatccctgacacaatgcctcagctccgcacccaagctgctcagatgctctccatgttcggcagcacttatctatgcgagcaacttttctcctcgatgaagatgaccaaaacaactcacaggagacgtctgactgatgaacatcttcgctcgatactgaggatttcttcagctcagagcttgagcccag

Function


NR:

description
PREDICTED: general transcription factor II-I repeat domain-containing protein 2-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1599377 True 341 TUCP 0.49 1 64284207 64284547

Neighbor


gene id symbol gene type direction distance location
LOC110492532 tp53inp2 coding downstream 47708 64220384 ~ 64244660 (-)
LOC110492530 ggt7 coding downstream 64887 64205792 ~ 64219320 (-)
LOC110492529 LOC106566555 coding downstream 83367 64180193 ~ 64200840 (-)
LOC110492527 top1 coding downstream 104309 64149331 ~ 64179898 (-)
plcg1 plcg1 coding downstream 138543 64107995 ~ 64145664 (-)
LOC110492535 samhd1 coding upstream 31673 64316220 ~ 64342275 (-)
LOC110492536 LOC106566564 coding upstream 63698 64348245 ~ 64391338 (-)
LOC110492537 LOC106566565 coding upstream 107081 64391628 ~ 64397409 (-)
si:ch211-117c9.5 LOC106566567 coding upstream 162251 64445355 ~ 64485638 (-)
LOC110492541 LOC106566539 coding upstream 206836 64491383 ~ 64514012 (-)
G1400556 NA non-coding downstream 14657 64269218 ~ 64269550 (-)
G1400520 NA non-coding downstream 23639 64260281 ~ 64260568 (-)
G1400542 NA non-coding downstream 74005 64208995 ~ 64210202 (-)
G1400517 NA non-coding downstream 85909 64128353 ~ 64198298 (-)
G1400639 NA non-coding upstream 119154 64403701 ~ 64403998 (-)
G1400652 NA non-coding upstream 145163 64429710 ~ 64430791 (-)
G1400655 NA non-coding upstream 164855 64449402 ~ 64450195 (-)
G1400670 NA non-coding upstream 184514 64469061 ~ 64469500 (-)
G1400676 NA non-coding upstream 197309 64481856 ~ 64482510 (-)
G1400552 NA other downstream 26774 64256926 ~ 64257433 (-)
G1400503 zhx3 other downstream 179168 64103370 ~ 64105039 (-)
G1399367 NA other downstream 898945 63384849 ~ 63385262 (-)
G1399235 NA other downstream 992006 63199119 ~ 63292201 (-)
G1398619 NA other downstream 1548638 62734743 ~ 62735569 (-)
G1400565 LOC106575828 other upstream 1081 64285628 ~ 64285993 (-)
G1400578 NA other upstream 25336 64309883 ~ 64310456 (-)
G1401617 NA other upstream 1350935 65635482 ~ 65636372 (-)
LOC110492562 LOC106568106 other upstream 1435960 65715711 ~ 65754610 (-)

Expression



Co-expression Network