G1400578



Basic Information


Item Value
gene id G1400578
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 64309883 ~ 64310456 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1599394
tagtcgtacagaggcccattatcagcaaccactcctgttttccaatggcacgttgtgttagctaatccaagtttatcattttaaacgactaattgatcattagaaaacccatttgcaattatgttagcacagctgaaaactgttgtctgattaaagaagcaattaactGGCGTTCTTTatgctagttgagtatctggagcatcagcatttgaaggtttgattacaggctcaaaatgaccagaaacaaagaactttcttctgaaactcatcagtctattgttattctgagaaatgaaggctattccatgcgagaaattgccaagaaactgaagatcttgtacaacgctgtgtactactcccttcaaagaacagcgcaaactggccctaaccagaatagaaagaggagtgggaggccccggtgcacaactgagcaagaggacaagtatattagagtgtctagtttgagaaacagatgcctcacaagtcctcaactggcagcttcattaaagagtacccgcaaaacaccagtctcaacgtctacagagaggaggtgactccgggatgctggccttct

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1599394 True 574 TUCP 0.42 1 64309883 64310456

Neighbor


gene id symbol gene type direction distance location
LOC110492532 tp53inp2 coding downstream 73384 64220384 ~ 64244660 (-)
LOC110492530 ggt7 coding downstream 90563 64205792 ~ 64219320 (-)
LOC110492529 LOC106566555 coding downstream 109043 64180193 ~ 64200840 (-)
LOC110492527 top1 coding downstream 129985 64149331 ~ 64179898 (-)
plcg1 plcg1 coding downstream 164219 64107995 ~ 64145664 (-)
LOC110492535 samhd1 coding upstream 5764 64316220 ~ 64342275 (-)
LOC110492536 LOC106566564 coding upstream 37789 64348245 ~ 64391338 (-)
LOC110492537 LOC106566565 coding upstream 81172 64391628 ~ 64397409 (-)
si:ch211-117c9.5 LOC106566567 coding upstream 136342 64445355 ~ 64485638 (-)
LOC110492541 LOC106566539 coding upstream 180927 64491383 ~ 64514012 (-)
G1400556 NA non-coding downstream 40333 64269218 ~ 64269550 (-)
G1400520 NA non-coding downstream 49315 64260281 ~ 64260568 (-)
G1400542 NA non-coding downstream 99681 64208995 ~ 64210202 (-)
G1400528 NA non-coding downstream 161767 64147815 ~ 64148116 (-)
G1400639 NA non-coding upstream 93245 64403701 ~ 64403998 (-)
G1400652 NA non-coding upstream 119254 64429710 ~ 64430791 (-)
G1400655 NA non-coding upstream 138946 64449402 ~ 64450195 (-)
G1400670 NA non-coding upstream 158605 64469061 ~ 64469500 (-)
G1400676 NA non-coding upstream 171400 64481856 ~ 64482510 (-)
G1400565 LOC106575828 other downstream 23890 64285628 ~ 64285993 (-)
G1400564 LOC106597321 other downstream 25336 64284207 ~ 64284547 (-)
G1400552 NA other downstream 52450 64256926 ~ 64257433 (-)
G1400503 zhx3 other downstream 204844 64103370 ~ 64105039 (-)
G1399367 NA other downstream 924621 63384849 ~ 63385262 (-)
G1401617 NA other upstream 1325026 65635482 ~ 65636372 (-)
LOC110492562 LOC106568106 other upstream 1410051 65715711 ~ 65754610 (-)
G1402686 srpk3 other upstream 2115095 66425551 ~ 66426322 (-)
G1402707 LOC106566505 other upstream 2174445 66484901 ~ 66494667 (-)

Expression



Co-expression Network