G1400699


Basic Information

Item Value
gene id G1400699
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 64539752 ~ 64540851 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1599536
tatagagagaagtgtatagagagagagtatagagagaggtgtatagagagagaggtgtatagagagaggtgtatagagagaggtgtatagagagaggtgtatagagagaggtgtatagagagtggtgtatagagagaggtgtatagagagaggtgtatagagagtggtgtatagagagaggtgtatagagagaggtgtatagagagaggtgtatagagagtgGGATGAACACGCCTGGAGAAAGAAAAAGCCACCAAGGGTAACGGTCATGCTCTGGATTCCGGATTGcggtataatgtgtgtgtgtgtaccaaggGATCCGGTCCTGTGCAGGGTGAGGTAGGGCCTGTCGCGGTCCAGGCCTGGGTTGTCTCTGCGCAGGGCAGCGGTGCGGCCAAGGTGGCCAGCGTACTGACGCAGGAAGGACGGAGCGCTGTGAGAGGCTGGGGGATGTATACTAACAGGACACACCACCAtgggctctgagagagagaaggagggagagagggacgggaggagggagagggaggagggagagaggcaagggtagagagagaaggaagagggagagagggaagggaggagggaggaggaggagggagagagggaagggaggagagagggagaaggaggagggagagggaagggagtagggagagggaggagagagagagggaagggaggagggagagggagaagggagagggaggagggagagagggaagggaggagggagggagaaggaggagggagagggaagggagtagggagagggttgagagagagagggaagggaggagggagagggaggagggagagagggaagggaggagggagatggaagggtagagagagagggaggagggagagggagggatgagggagagagggaagggaggagggagagg

Function

NR:

description
PREDICTED: cyclin-dependent kinase 15-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1599536 True 908 lncRNA 0.57 2 64539752 64540851

Neighbor

gene id symbol gene type direction distance location
LOC110492541 LOC106566539 coding downstream 25740 64491383 ~ 64514012 (-)
si:ch211-117c9.5 LOC106566567 coding downstream 54114 64445355 ~ 64485638 (-)
LOC110492537 LOC106566565 coding downstream 142343 64391628 ~ 64397409 (-)
LOC110492536 LOC106566564 coding downstream 148414 64348245 ~ 64391338 (-)
LOC110492535 samhd1 coding downstream 197477 64316220 ~ 64342275 (-)
parapinopsina LOC100135831 coding upstream 104550 64645401 ~ 64650567 (-)
LOC110492546 NA coding upstream 112939 64653790 ~ 64666518 (-)
LOC110492543 LOC106566530 coding upstream 125873 64666724 ~ 64673620 (-)
LOC110492544 NA coding upstream 141767 64682618 ~ 64688581 (-)
LOC110492545 lrtm1 coding upstream 443411 64984262 ~ 64991471 (-)
G1400619 NA non-coding downstream 51368 64486869 ~ 64488384 (-)
G1400676 NA non-coding downstream 57242 64481856 ~ 64482510 (-)
G1400670 NA non-coding downstream 70252 64469061 ~ 64469500 (-)
G1400655 NA non-coding downstream 89557 64449402 ~ 64450195 (-)
G1400652 NA non-coding downstream 108961 64429710 ~ 64430791 (-)
G1400714 NA non-coding upstream 23994 64564845 ~ 64567234 (-)
G1400715 NA non-coding upstream 25654 64566505 ~ 64571927 (-)
G1400730 NA non-coding upstream 58102 64598953 ~ 64599608 (-)
G1400721 NA non-coding upstream 102454 64643305 ~ 64691411 (-)
G1400851 NA non-coding upstream 313332 64854183 ~ 64854726 (-)
G1400578 NA other downstream 229296 64309883 ~ 64310456 (-)
G1400565 LOC106575828 other downstream 253759 64285628 ~ 64285993 (-)
G1400564 LOC106597321 other downstream 255205 64284207 ~ 64284547 (-)
G1400552 NA other downstream 282319 64256926 ~ 64257433 (-)
G1401617 NA other upstream 1094631 65635482 ~ 65636372 (-)
LOC110492562 LOC106568106 other upstream 1179656 65715711 ~ 65754610 (-)
G1402686 srpk3 other upstream 1884700 66425551 ~ 66426322 (-)
G1402707 LOC106566505 other upstream 1944050 66484901 ~ 66494667 (-)
G1403498 NA other upstream 2902570 67443421 ~ 67444179 (-)

Expression

G1400699 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 2.
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G1400699 Expression in each Bioproject

Bar chart with 11 bars.
G1400699 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 30.
End of interactive chart.

Co-expression Network