Gene
RNA
| Item | Value |
|---|---|
| gene id | G1400220 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 64609403 ~ 64609762 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1598964 | True | 230 | lncRNA | 0.48 | 2 | 64609403 | 64609762 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492542 | LOC106566540 | coding | upstream | 98627 | 64506307 ~ 64510776 (+) |
| LOC110492539 | LOC106566566 | coding | upstream | 176739 | 64407997 ~ 64432664 (+) |
| trnag-gcc-17 | NA | coding | upstream | 242598 | 64366735 ~ 64366805 (+) |
| trnag-gcc-16 | NA | coding | upstream | 248008 | 64361325 ~ 64361395 (+) |
| trnag-gcc-15 | NA | coding | upstream | 248779 | 64360554 ~ 64360624 (+) |
| LOC100136613 | LOC106566534 | coding | downstream | 20681 | 64630443 ~ 64645181 (+) |
| LOC110492553 | LOC106566530 | coding | downstream | 61006 | 64670768 ~ 64673832 (+) |
| cacna2d3a | LOC102307471 | coding | downstream | 112780 | 64722542 ~ 65037527 (+) |
| capza1b | capza1 | coding | downstream | 1038594 | 65648356 ~ 65653937 (+) |
| LOC110492564 | LOC102303593 | coding | downstream | 1386265 | 65996027 ~ 66267216 (+) |
| G1400256 | NA | non-coding | upstream | 14879 | 64593856 ~ 64594524 (+) |
| G1400249 | NA | non-coding | upstream | 34626 | 64569929 ~ 64574777 (+) |
| G1400246 | NA | non-coding | upstream | 38349 | 64565533 ~ 64571054 (+) |
| G1400234 | NA | non-coding | upstream | 57955 | 64550219 ~ 64551448 (+) |
| G1400213 | LOC106566539 | non-coding | upstream | 95901 | 64512755 ~ 64513502 (+) |
| G1400267 | NA | non-coding | downstream | 7576 | 64617338 ~ 64617798 (+) |
| G1400269 | NA | non-coding | downstream | 44045 | 64653807 ~ 64735625 (+) |
| G1400308 | NA | non-coding | downstream | 91275 | 64701037 ~ 64705227 (+) |
| G1400334 | NA | non-coding | downstream | 150156 | 64759918 ~ 64764466 (+) |
| G1400202 | LOC106566541 | other | upstream | 135115 | 64473548 ~ 64476421 (+) |
| G1400095 | NA | other | upstream | 361701 | 64247297 ~ 64247702 (+) |
| G1400047 | NA | other | upstream | 382962 | 64159170 ~ 64244664 (+) |
| G1400056 | top1 | other | upstream | 429948 | 64166374 ~ 64179455 (+) |
| G1399694 | NA | other | upstream | 923259 | 63685566 ~ 63686144 (+) |
| G1401041 | NA | other | downstream | 580228 | 65189990 ~ 65190275 (+) |
| G1401074 | NA | other | downstream | 648753 | 65258515 ~ 65258844 (+) |
| G1401354 | NA | other | downstream | 1286129 | 65895891 ~ 65897063 (+) |
| G1401782 | NA | other | downstream | 1409239 | 66019001 ~ 66024245 (+) |
| G1402066 | NA | other | downstream | 1933549 | 66543311 ~ 66543685 (+) |
