Gene
RNA
| Item | Value |
|---|---|
| gene id | G1400946 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 65058653 ~ 65058890 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1599845 | True | 238 | lncRNA | 0.45 | 1 | 65058653 | 65058890 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492545 | lrtm1 | coding | downstream | 67182 | 64984262 ~ 64991471 (-) |
| LOC110492544 | NA | coding | downstream | 370072 | 64682618 ~ 64688581 (-) |
| LOC110492543 | LOC106566530 | coding | downstream | 385033 | 64666724 ~ 64673620 (-) |
| LOC110492546 | NA | coding | downstream | 392135 | 64653790 ~ 64666518 (-) |
| parapinopsina | LOC100135831 | coding | downstream | 408086 | 64645401 ~ 64650567 (-) |
| wnt5a | LOC106566524 | coding | upstream | 35899 | 65094789 ~ 65129767 (-) |
| LOC110518541 | LOC106566519 | coding | upstream | 72760 | 65131650 ~ 65620292 (-) |
| tlr9 | tlr9 | coding | upstream | 564285 | 65623175 ~ 65628493 (-) |
| apeh | apeh | coding | upstream | 574240 | 65633130 ~ 65644141 (-) |
| cttnbp2nlb | cttnbp2nl | coding | upstream | 601390 | 65660280 ~ 65704778 (-) |
| G1400942 | NA | non-coding | downstream | 1845 | 65056586 ~ 65056808 (-) |
| G1400933 | NA | non-coding | downstream | 19922 | 65038300 ~ 65038731 (-) |
| G1400907 | NA | non-coding | downstream | 86047 | 64966626 ~ 64972606 (-) |
| G1400904 | NA | non-coding | downstream | 102743 | 64954598 ~ 64955910 (-) |
| G1400877 | NA | non-coding | downstream | 151096 | 64906896 ~ 64907557 (-) |
| G1400953 | NA | non-coding | upstream | 3926 | 65062816 ~ 65063036 (-) |
| G1400962 | NA | non-coding | upstream | 14311 | 65073201 ~ 65073430 (-) |
| G1400978 | NA | non-coding | upstream | 23314 | 65082204 ~ 65082623 (-) |
| G1400990 | NA | non-coding | upstream | 34593 | 65093483 ~ 65094258 (-) |
| G1401011 | NA | non-coding | upstream | 57523 | 65116413 ~ 65116805 (-) |
| si:ch211-117c9.5 | LOC106566567 | other | downstream | 610181 | 64445355 ~ 64485638 (-) |
| G1400578 | NA | other | downstream | 748197 | 64309883 ~ 64310456 (-) |
| G1400565 | LOC106575828 | other | downstream | 772660 | 64285628 ~ 64285993 (-) |
| G1400564 | LOC106597321 | other | downstream | 774106 | 64284207 ~ 64284547 (-) |
| G1400552 | NA | other | downstream | 801220 | 64256926 ~ 64257433 (-) |
| G1401617 | NA | other | upstream | 576592 | 65635482 ~ 65636372 (-) |
| LOC110492562 | LOC106568106 | other | upstream | 661617 | 65715711 ~ 65754610 (-) |
| G1402686 | srpk3 | other | upstream | 1366661 | 66425551 ~ 66426322 (-) |
| G1402707 | LOC106566505 | other | upstream | 1426011 | 66484901 ~ 66494667 (-) |
| G1403498 | NA | other | upstream | 2384531 | 67443421 ~ 67444179 (-) |
