Gene
RNA
| Item | Value |
|---|---|
| gene id | G1400962 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 65073201 ~ 65073430 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1599861 | True | 230 | lncRNA | 0.41 | 1 | 65073201 | 65073430 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492545 | lrtm1 | coding | downstream | 81730 | 64984262 ~ 64991471 (-) |
| LOC110492544 | NA | coding | downstream | 384620 | 64682618 ~ 64688581 (-) |
| LOC110492543 | LOC106566530 | coding | downstream | 399581 | 64666724 ~ 64673620 (-) |
| LOC110492546 | NA | coding | downstream | 406683 | 64653790 ~ 64666518 (-) |
| parapinopsina | LOC100135831 | coding | downstream | 422634 | 64645401 ~ 64650567 (-) |
| wnt5a | LOC106566524 | coding | upstream | 21359 | 65094789 ~ 65129767 (-) |
| LOC110518541 | LOC106566519 | coding | upstream | 58220 | 65131650 ~ 65620292 (-) |
| tlr9 | tlr9 | coding | upstream | 549745 | 65623175 ~ 65628493 (-) |
| apeh | apeh | coding | upstream | 559700 | 65633130 ~ 65644141 (-) |
| cttnbp2nlb | cttnbp2nl | coding | upstream | 586850 | 65660280 ~ 65704778 (-) |
| G1400953 | NA | non-coding | downstream | 10165 | 65062816 ~ 65063036 (-) |
| G1400946 | NA | non-coding | downstream | 14311 | 65058653 ~ 65058890 (-) |
| G1400942 | NA | non-coding | downstream | 16393 | 65056586 ~ 65056808 (-) |
| G1400933 | NA | non-coding | downstream | 34470 | 65038300 ~ 65038731 (-) |
| G1400907 | NA | non-coding | downstream | 100595 | 64966626 ~ 64972606 (-) |
| G1400978 | NA | non-coding | upstream | 8774 | 65082204 ~ 65082623 (-) |
| G1400990 | NA | non-coding | upstream | 20053 | 65093483 ~ 65094258 (-) |
| G1401011 | NA | non-coding | upstream | 42983 | 65116413 ~ 65116805 (-) |
| G1401393 | NA | non-coding | upstream | 71615 | 65145045 ~ 65145531 (-) |
| si:ch211-117c9.5 | LOC106566567 | other | downstream | 624729 | 64445355 ~ 64485638 (-) |
| G1400578 | NA | other | downstream | 762745 | 64309883 ~ 64310456 (-) |
| G1400565 | LOC106575828 | other | downstream | 787208 | 64285628 ~ 64285993 (-) |
| G1400564 | LOC106597321 | other | downstream | 788654 | 64284207 ~ 64284547 (-) |
| G1400552 | NA | other | downstream | 815768 | 64256926 ~ 64257433 (-) |
| G1401617 | NA | other | upstream | 562052 | 65635482 ~ 65636372 (-) |
| LOC110492562 | LOC106568106 | other | upstream | 647077 | 65715711 ~ 65754610 (-) |
| G1402686 | srpk3 | other | upstream | 1352121 | 66425551 ~ 66426322 (-) |
| G1402707 | LOC106566505 | other | upstream | 1411471 | 66484901 ~ 66494667 (-) |
| G1403498 | NA | other | upstream | 2369991 | 67443421 ~ 67444179 (-) |
