Gene
RNA
| Item | Value |
|---|---|
| gene id | G1401027 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 65152791 ~ 65153032 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1599942 | True | 242 | lncRNA | 0.44 | 1 | 65152791 | 65153032 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cacna2d3a | LOC102307471 | coding | upstream | 116508 | 64722542 ~ 65037527 (+) |
| LOC110492553 | LOC106566530 | coding | upstream | 478959 | 64670768 ~ 64673832 (+) |
| LOC100136613 | LOC106566534 | coding | upstream | 507610 | 64630443 ~ 64645181 (+) |
| LOC110519666 | LOC108235233 | coding | upstream | 530323 | 64517151 ~ 64622468 (+) |
| LOC110492542 | LOC106566540 | coding | upstream | 642015 | 64506307 ~ 64510776 (+) |
| capza1b | capza1 | coding | downstream | 495324 | 65648356 ~ 65653937 (+) |
| LOC110492564 | LOC102303593 | coding | downstream | 842995 | 65996027 ~ 66267216 (+) |
| srpk3 | srpk3 | coding | downstream | 1270857 | 66423889 ~ 66434911 (+) |
| comta | LOC106566505 | coding | downstream | 1324245 | 66477277 ~ 66494685 (+) |
| grm6a | LOC106566502 | coding | downstream | 1371704 | 66524736 ~ 66565764 (+) |
| G1401026 | NA | non-coding | upstream | 47 | 65152472 ~ 65152744 (+) |
| G1401025 | NA | non-coding | upstream | 494 | 65151910 ~ 65152297 (+) |
| G1401019 | NA | non-coding | upstream | 19535 | 65131871 ~ 65133256 (+) |
| G1401018 | NA | non-coding | upstream | 21251 | 65131316 ~ 65131540 (+) |
| G1400983 | NA | non-coding | upstream | 66421 | 65086101 ~ 65086370 (+) |
| G1401034 | NA | non-coding | downstream | 8113 | 65161145 ~ 65163351 (+) |
| G1401035 | NA | non-coding | downstream | 28821 | 65181853 ~ 65182096 (+) |
| G1401044 | NA | non-coding | downstream | 46768 | 65199800 ~ 65200230 (+) |
| G1401045 | NA | non-coding | downstream | 53076 | 65206108 ~ 65206507 (+) |
| G1401049 | NA | non-coding | downstream | 60635 | 65213667 ~ 65214042 (+) |
| G1400202 | LOC106566541 | other | upstream | 678503 | 64473548 ~ 64476421 (+) |
| G1400095 | NA | other | upstream | 905089 | 64247297 ~ 64247702 (+) |
| G1400047 | NA | other | upstream | 926350 | 64159170 ~ 64244664 (+) |
| G1400056 | top1 | other | upstream | 973336 | 64166374 ~ 64179455 (+) |
| G1399694 | NA | other | upstream | 1466647 | 63685566 ~ 63686144 (+) |
| G1401041 | NA | other | downstream | 36958 | 65189990 ~ 65190275 (+) |
| G1401074 | NA | other | downstream | 105483 | 65258515 ~ 65258844 (+) |
| G1401354 | NA | other | downstream | 742859 | 65895891 ~ 65897063 (+) |
| G1401782 | NA | other | downstream | 865969 | 66019001 ~ 66024245 (+) |
| G1402066 | NA | other | downstream | 1390279 | 66543311 ~ 66543685 (+) |
