Gene
RNA
| Item | Value |
|---|---|
| gene id | G1401400 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 65156038 ~ 65156422 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1600399 | True | 385 | lncRNA | 0.53 | 1 | 65156038 | 65156422 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| wnt5a | LOC106566524 | coding | downstream | 26271 | 65094789 ~ 65129767 (-) |
| LOC110492545 | lrtm1 | coding | downstream | 164567 | 64984262 ~ 64991471 (-) |
| LOC110492544 | NA | coding | downstream | 467457 | 64682618 ~ 64688581 (-) |
| LOC110492543 | LOC106566530 | coding | downstream | 482418 | 64666724 ~ 64673620 (-) |
| LOC110492546 | NA | coding | downstream | 489520 | 64653790 ~ 64666518 (-) |
| tlr9 | tlr9 | coding | upstream | 466753 | 65623175 ~ 65628493 (-) |
| apeh | apeh | coding | upstream | 476708 | 65633130 ~ 65644141 (-) |
| cttnbp2nlb | cttnbp2nl | coding | upstream | 503858 | 65660280 ~ 65704778 (-) |
| LOC110492562 | LOC106568106 | coding | upstream | 559289 | 65715711 ~ 65754610 (-) |
| ddx20 | ddx20 | coding | upstream | 1113215 | 66269637 ~ 66276483 (-) |
| G1401396 | NA | non-coding | downstream | 4127 | 65151677 ~ 65151911 (-) |
| G1401393 | NA | non-coding | downstream | 10507 | 65145045 ~ 65145531 (-) |
| LOC110518541 | LOC106566519 | non-coding | downstream | 22993 | 65131650 ~ 65620292 (-) |
| G1401011 | NA | non-coding | downstream | 39233 | 65116413 ~ 65116805 (-) |
| G1400990 | NA | non-coding | downstream | 61780 | 65093483 ~ 65094258 (-) |
| G1401401 | NA | non-coding | upstream | 154 | 65156576 ~ 65156826 (-) |
| G1401403 | NA | non-coding | upstream | 4773 | 65161195 ~ 65163285 (-) |
| G1401405 | NA | non-coding | upstream | 9986 | 65166408 ~ 65166726 (-) |
| G1401406 | NA | non-coding | upstream | 23938 | 65180360 ~ 65180863 (-) |
| G1401407 | NA | non-coding | upstream | 26920 | 65183342 ~ 65184343 (-) |
| si:ch211-117c9.5 | LOC106566567 | other | downstream | 707566 | 64445355 ~ 64485638 (-) |
| G1400578 | NA | other | downstream | 845582 | 64309883 ~ 64310456 (-) |
| G1400565 | LOC106575828 | other | downstream | 870045 | 64285628 ~ 64285993 (-) |
| G1400564 | LOC106597321 | other | downstream | 871491 | 64284207 ~ 64284547 (-) |
| G1400552 | NA | other | downstream | 898605 | 64256926 ~ 64257433 (-) |
| G1401617 | NA | other | upstream | 479060 | 65635482 ~ 65636372 (-) |
| G1402686 | srpk3 | other | upstream | 1269129 | 66425551 ~ 66426322 (-) |
| G1402707 | LOC106566505 | other | upstream | 1328479 | 66484901 ~ 66494667 (-) |
| G1403498 | NA | other | upstream | 2286999 | 67443421 ~ 67444179 (-) |
