G1401062


Basic Information

Item Value
gene id G1401062
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 65234899 ~ 65235176 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1599979
cttgatgacagttttgcgcactcttggcattctctcaaccagcttcacctggaatgattttccaaccgtcttgaaggagttcacatatatgctgagcacttgttggttgcttttccttcactctgcggtccaactcatcccaaaccatctcaatttggttgaggttgggtgattgtggagacaaggtcatctgaggcagcactccatcactctcattcttggtcaaatagctcttacacagcctggaggtgtgttgggttattgtcctgttaaaaaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1599979 True 278 lncRNA 0.46 1 65234899 65235176

Neighbor

gene id symbol gene type direction distance location
cacna2d3a LOC102307471 coding upstream 198616 64722542 ~ 65037527 (+)
LOC110492553 LOC106566530 coding upstream 561067 64670768 ~ 64673832 (+)
LOC100136613 LOC106566534 coding upstream 589718 64630443 ~ 64645181 (+)
LOC110519666 LOC108235233 coding upstream 612431 64517151 ~ 64622468 (+)
LOC110492542 LOC106566540 coding upstream 724123 64506307 ~ 64510776 (+)
capza1b capza1 coding downstream 413180 65648356 ~ 65653937 (+)
LOC110492564 LOC102303593 coding downstream 760851 65996027 ~ 66267216 (+)
srpk3 srpk3 coding downstream 1188713 66423889 ~ 66434911 (+)
comta LOC106566505 coding downstream 1242101 66477277 ~ 66494685 (+)
grm6a LOC106566502 coding downstream 1289560 66524736 ~ 66565764 (+)
G1401060 NA non-coding upstream 1587 65233101 ~ 65233312 (+)
G1401059 NA non-coding upstream 4418 65230253 ~ 65230481 (+)
G1401050 NA non-coding upstream 19921 65214753 ~ 65214978 (+)
G1401049 NA non-coding upstream 20857 65213667 ~ 65214042 (+)
G1401045 NA non-coding upstream 28392 65206108 ~ 65206507 (+)
G1401065 NA non-coding downstream 4966 65240142 ~ 65240361 (+)
G1401068 NA non-coding downstream 7542 65242718 ~ 65242957 (+)
G1401072 NA non-coding downstream 21093 65256269 ~ 65256491 (+)
G1401073 NA non-coding downstream 22623 65257799 ~ 65258022 (+)
G1401079 NA non-coding downstream 33361 65268537 ~ 65268741 (+)
G1401041 NA other upstream 44624 65189990 ~ 65190275 (+)
G1400202 LOC106566541 other upstream 760611 64473548 ~ 64476421 (+)
G1400095 NA other upstream 987197 64247297 ~ 64247702 (+)
G1400047 NA other upstream 1008458 64159170 ~ 64244664 (+)
G1401074 NA other downstream 23339 65258515 ~ 65258844 (+)
G1401354 NA other downstream 660715 65895891 ~ 65897063 (+)
G1401782 NA other downstream 783825 66019001 ~ 66024245 (+)
G1402066 NA other downstream 1308135 66543311 ~ 66543685 (+)
G1402256 NA other downstream 1679189 66914365 ~ 66914716 (+)

Expression


Co-expression Network