G1401072


Basic Information

Item Value
gene id G1401072
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 65256269 ~ 65256491 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1599989
CTGGTCCATTGGGGCTCTGTGGTTGGCGTGGGGTGGTCCTCTTGCAGGGGTCCGGTGGTGTGGGTGAGCAGGGTGAGCCGGGTGTACCCCCGGGTGGgggtggtgaggatgatgagggTGTAGATGTTCTTCATCATAGTTGTCTGCTATGAGCTTCATCCTACTCTGGGTCTGGAGGAGAACATTTACAATTTATAGCGTGTTTTGCATTTATCAATCTCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1599989 True 223 lncRNA 0.53 1 65256269 65256491

Neighbor

gene id symbol gene type direction distance location
cacna2d3a LOC102307471 coding upstream 219986 64722542 ~ 65037527 (+)
LOC110492553 LOC106566530 coding upstream 582437 64670768 ~ 64673832 (+)
LOC100136613 LOC106566534 coding upstream 611088 64630443 ~ 64645181 (+)
LOC110519666 LOC108235233 coding upstream 633801 64517151 ~ 64622468 (+)
LOC110492542 LOC106566540 coding upstream 745493 64506307 ~ 64510776 (+)
capza1b capza1 coding downstream 391865 65648356 ~ 65653937 (+)
LOC110492564 LOC102303593 coding downstream 739536 65996027 ~ 66267216 (+)
srpk3 srpk3 coding downstream 1167398 66423889 ~ 66434911 (+)
comta LOC106566505 coding downstream 1220786 66477277 ~ 66494685 (+)
grm6a LOC106566502 coding downstream 1268245 66524736 ~ 66565764 (+)
G1401068 NA non-coding upstream 13312 65242718 ~ 65242957 (+)
G1401065 NA non-coding upstream 15908 65240142 ~ 65240361 (+)
G1401062 NA non-coding upstream 21093 65234899 ~ 65235176 (+)
G1401060 NA non-coding upstream 22957 65233101 ~ 65233312 (+)
G1401059 NA non-coding upstream 25788 65230253 ~ 65230481 (+)
G1401073 NA non-coding downstream 1308 65257799 ~ 65258022 (+)
G1401079 NA non-coding downstream 12046 65268537 ~ 65268741 (+)
G1401081 NA non-coding downstream 14929 65271420 ~ 65271662 (+)
G1401117 NA non-coding downstream 91500 65347991 ~ 65348387 (+)
G1401149 NA non-coding downstream 166517 65423008 ~ 65423887 (+)
G1401041 NA other upstream 65994 65189990 ~ 65190275 (+)
G1400202 LOC106566541 other upstream 781981 64473548 ~ 64476421 (+)
G1400095 NA other upstream 1008567 64247297 ~ 64247702 (+)
G1400047 NA other upstream 1029828 64159170 ~ 64244664 (+)
G1401074 NA other downstream 2024 65258515 ~ 65258844 (+)
G1401354 NA other downstream 639400 65895891 ~ 65897063 (+)
G1401782 NA other downstream 762510 66019001 ~ 66024245 (+)
G1402066 NA other downstream 1286820 66543311 ~ 66543685 (+)
G1402256 NA other downstream 1657874 66914365 ~ 66914716 (+)

Expression


Co-expression Network