Gene
RNA
| Item | Value |
|---|---|
| gene id | G1401081 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 65271420 ~ 65271662 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1599998 | True | 243 | lncRNA | 0.39 | 1 | 65271420 | 65271662 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cacna2d3a | LOC102307471 | coding | upstream | 235137 | 64722542 ~ 65037527 (+) |
| LOC110492553 | LOC106566530 | coding | upstream | 597588 | 64670768 ~ 64673832 (+) |
| LOC100136613 | LOC106566534 | coding | upstream | 626239 | 64630443 ~ 64645181 (+) |
| LOC110519666 | LOC108235233 | coding | upstream | 648952 | 64517151 ~ 64622468 (+) |
| LOC110492542 | LOC106566540 | coding | upstream | 760644 | 64506307 ~ 64510776 (+) |
| capza1b | capza1 | coding | downstream | 376694 | 65648356 ~ 65653937 (+) |
| LOC110492564 | LOC102303593 | coding | downstream | 724365 | 65996027 ~ 66267216 (+) |
| srpk3 | srpk3 | coding | downstream | 1152227 | 66423889 ~ 66434911 (+) |
| comta | LOC106566505 | coding | downstream | 1205615 | 66477277 ~ 66494685 (+) |
| grm6a | LOC106566502 | coding | downstream | 1253074 | 66524736 ~ 66565764 (+) |
| G1401079 | NA | non-coding | upstream | 2679 | 65268537 ~ 65268741 (+) |
| G1401073 | NA | non-coding | upstream | 13398 | 65257799 ~ 65258022 (+) |
| G1401072 | NA | non-coding | upstream | 14929 | 65256269 ~ 65256491 (+) |
| G1401068 | NA | non-coding | upstream | 28463 | 65242718 ~ 65242957 (+) |
| G1401065 | NA | non-coding | upstream | 31059 | 65240142 ~ 65240361 (+) |
| G1401117 | NA | non-coding | downstream | 76329 | 65347991 ~ 65348387 (+) |
| G1401149 | NA | non-coding | downstream | 151346 | 65423008 ~ 65423887 (+) |
| G1401156 | NA | non-coding | downstream | 167032 | 65438694 ~ 65438996 (+) |
| G1401158 | NA | non-coding | downstream | 175823 | 65447485 ~ 65447842 (+) |
| G1401164 | NA | non-coding | downstream | 185535 | 65457197 ~ 65457506 (+) |
| G1401074 | NA | other | upstream | 12576 | 65258515 ~ 65258844 (+) |
| G1401041 | NA | other | upstream | 81145 | 65189990 ~ 65190275 (+) |
| G1400202 | LOC106566541 | other | upstream | 797132 | 64473548 ~ 64476421 (+) |
| G1400095 | NA | other | upstream | 1023718 | 64247297 ~ 64247702 (+) |
| G1400056 | top1 | other | upstream | 1091965 | 64166374 ~ 64179455 (+) |
| G1401354 | NA | other | downstream | 624229 | 65895891 ~ 65897063 (+) |
| G1401782 | NA | other | downstream | 747339 | 66019001 ~ 66024245 (+) |
| G1402066 | NA | other | downstream | 1271649 | 66543311 ~ 66543685 (+) |
| G1402256 | NA | other | downstream | 1642703 | 66914365 ~ 66914716 (+) |
| LOC110492593 | LOC105017353 | other | downstream | 2200282 | 67459278 ~ 67476876 (+) |
