G1401156


Basic Information

Item Value
gene id G1401156
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 65438694 ~ 65438996 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1600078
gtaggcagacctggctctcaagagaagacagcctatgtgctcactgcccacaaaatgatgtggaaactgagctgcacttcctaacctcctgcccaatgtatgaccatattagagagacagatTTCCCTCAGATttcacagatccacaaagaattcgaaaacaaatccaaatttgataaactcccatatctactgggtgaaataccacagtgtgccatcacagcagcaagatttgtgacctgttgccacgagaaaagggtaaacagtgaagaacaaacaccattgtaaatacaacccatattta

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1600078 True 303 lncRNA 0.43 1 65438694 65438996

Neighbor

gene id symbol gene type direction distance location
cacna2d3a LOC102307471 coding upstream 402411 64722542 ~ 65037527 (+)
LOC110492553 LOC106566530 coding upstream 764862 64670768 ~ 64673832 (+)
LOC100136613 LOC106566534 coding upstream 793513 64630443 ~ 64645181 (+)
LOC110519666 LOC108235233 coding upstream 816226 64517151 ~ 64622468 (+)
LOC110492542 LOC106566540 coding upstream 927918 64506307 ~ 64510776 (+)
capza1b capza1 coding downstream 209360 65648356 ~ 65653937 (+)
LOC110492564 LOC102303593 coding downstream 557031 65996027 ~ 66267216 (+)
srpk3 srpk3 coding downstream 984893 66423889 ~ 66434911 (+)
comta LOC106566505 coding downstream 1038281 66477277 ~ 66494685 (+)
grm6a LOC106566502 coding downstream 1085740 66524736 ~ 66565764 (+)
G1401149 NA non-coding upstream 14807 65423008 ~ 65423887 (+)
G1401117 NA non-coding upstream 90307 65347991 ~ 65348387 (+)
G1401081 NA non-coding upstream 167032 65271420 ~ 65271662 (+)
G1401079 NA non-coding upstream 169953 65268537 ~ 65268741 (+)
G1401073 NA non-coding upstream 180672 65257799 ~ 65258022 (+)
G1401158 NA non-coding downstream 8489 65447485 ~ 65447842 (+)
G1401164 NA non-coding downstream 18201 65457197 ~ 65457506 (+)
G1401185 NA non-coding downstream 75412 65514408 ~ 65514638 (+)
G1401188 NA non-coding downstream 77319 65516315 ~ 65516518 (+)
G1401206 NA non-coding downstream 115915 65554911 ~ 65559728 (+)
G1401074 NA other upstream 179850 65258515 ~ 65258844 (+)
G1401041 NA other upstream 248419 65189990 ~ 65190275 (+)
G1400202 LOC106566541 other upstream 964406 64473548 ~ 64476421 (+)
G1400095 NA other upstream 1190992 64247297 ~ 64247702 (+)
G1400056 top1 other upstream 1259239 64166374 ~ 64179455 (+)
G1401354 NA other downstream 456895 65895891 ~ 65897063 (+)
G1401782 NA other downstream 580005 66019001 ~ 66024245 (+)
G1402066 NA other downstream 1104315 66543311 ~ 66543685 (+)
G1402256 NA other downstream 1475369 66914365 ~ 66914716 (+)
LOC110492593 LOC105017353 other downstream 2032948 67459278 ~ 67476876 (+)

Expression


Co-expression Network