Gene
RNA
| Item | Value |
|---|---|
| gene id | G1401606 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 65604227 ~ 65604892 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1600623 | False | 270 | lncRNA | 0.54 | 2 | 65604227 | 65604892 |
| TU1600624 | True | 270 | lncRNA | 0.53 | 2 | 65604227 | 65604892 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| wnt5a | LOC106566524 | coding | downstream | 474460 | 65094789 ~ 65129767 (-) |
| LOC110492545 | lrtm1 | coding | downstream | 612756 | 64984262 ~ 64991471 (-) |
| LOC110492544 | NA | coding | downstream | 915646 | 64682618 ~ 64688581 (-) |
| LOC110492543 | LOC106566530 | coding | downstream | 930607 | 64666724 ~ 64673620 (-) |
| LOC110492546 | NA | coding | downstream | 937709 | 64653790 ~ 64666518 (-) |
| tlr9 | tlr9 | coding | upstream | 18283 | 65623175 ~ 65628493 (-) |
| apeh | apeh | coding | upstream | 28238 | 65633130 ~ 65644141 (-) |
| cttnbp2nlb | cttnbp2nl | coding | upstream | 55388 | 65660280 ~ 65704778 (-) |
| LOC110492562 | LOC106568106 | coding | upstream | 110819 | 65715711 ~ 65754610 (-) |
| ddx20 | ddx20 | coding | upstream | 664745 | 66269637 ~ 66276483 (-) |
| G1401596 | NA | non-coding | downstream | 27328 | 65576408 ~ 65576899 (-) |
| G1401587 | NA | non-coding | downstream | 49418 | 65553392 ~ 65554809 (-) |
| G1401574 | NA | non-coding | downstream | 86683 | 65517258 ~ 65517544 (-) |
| G1401568 | NA | non-coding | downstream | 93646 | 65510332 ~ 65510581 (-) |
| G1401563 | NA | non-coding | downstream | 96838 | 65507172 ~ 65507389 (-) |
| G1401611 | NA | non-coding | upstream | 11919 | 65616811 ~ 65617245 (-) |
| G1401376 | capza1 | non-coding | upstream | 43504 | 65648396 ~ 65653934 (-) |
| G1401378 | NA | non-coding | upstream | 49725 | 65654617 ~ 65654855 (-) |
| G1401632 | NA | non-coding | upstream | 100855 | 65705747 ~ 65705961 (-) |
| G1401383 | NA | non-coding | upstream | 103733 | 65708625 ~ 65709149 (-) |
| si:ch211-117c9.5 | LOC106566567 | other | downstream | 1155755 | 64445355 ~ 64485638 (-) |
| G1400578 | NA | other | downstream | 1293771 | 64309883 ~ 64310456 (-) |
| G1400565 | LOC106575828 | other | downstream | 1318234 | 64285628 ~ 64285993 (-) |
| G1400564 | LOC106597321 | other | downstream | 1319680 | 64284207 ~ 64284547 (-) |
| G1400552 | NA | other | downstream | 1346794 | 64256926 ~ 64257433 (-) |
| G1401617 | NA | other | upstream | 30590 | 65635482 ~ 65636372 (-) |
| G1402686 | srpk3 | other | upstream | 820659 | 66425551 ~ 66426322 (-) |
| G1402707 | LOC106566505 | other | upstream | 880009 | 66484901 ~ 66494667 (-) |
| G1403498 | NA | other | upstream | 1838529 | 67443421 ~ 67444179 (-) |
