Gene
RNA
| Item | Value |
|---|---|
| gene id | G1401378 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 65654617 ~ 65654855 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1600371 | True | 239 | lncRNA | 0.37 | 1 | 65654617 | 65654855 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| apeh | apeh | coding | downstream | 10476 | 65633130 ~ 65644141 (-) |
| tlr9 | tlr9 | coding | downstream | 26124 | 65623175 ~ 65628493 (-) |
| LOC110518541 | LOC106566519 | coding | downstream | 34325 | 65131650 ~ 65620292 (-) |
| wnt5a | LOC106566524 | coding | downstream | 524850 | 65094789 ~ 65129767 (-) |
| LOC110492545 | lrtm1 | coding | downstream | 663146 | 64984262 ~ 64991471 (-) |
| cttnbp2nlb | cttnbp2nl | coding | upstream | 5425 | 65660280 ~ 65704778 (-) |
| LOC110492562 | LOC106568106 | coding | upstream | 60856 | 65715711 ~ 65754610 (-) |
| ddx20 | ddx20 | coding | upstream | 614782 | 66269637 ~ 66276483 (-) |
| LOC110492566 | LOC106566511 | coding | upstream | 626101 | 66280956 ~ 66296439 (-) |
| b4galt3 | b4galt3 | coding | upstream | 648734 | 66303589 ~ 66308067 (-) |
| G1401376 | capza1 | non-coding | downstream | 683 | 65648396 ~ 65653934 (-) |
| G1401611 | NA | non-coding | downstream | 37372 | 65616811 ~ 65617245 (-) |
| G1401606 | NA | non-coding | downstream | 49725 | 65604227 ~ 65604892 (-) |
| G1401596 | NA | non-coding | downstream | 77718 | 65576408 ~ 65576899 (-) |
| G1401587 | NA | non-coding | downstream | 99808 | 65553392 ~ 65554809 (-) |
| G1401632 | NA | non-coding | upstream | 50892 | 65705747 ~ 65705961 (-) |
| G1401383 | NA | non-coding | upstream | 53770 | 65708625 ~ 65709149 (-) |
| G1401667 | NA | non-coding | upstream | 190482 | 65845337 ~ 65847509 (-) |
| G1401692 | NA | non-coding | upstream | 228371 | 65883226 ~ 65883433 (-) |
| G1401617 | NA | other | downstream | 18245 | 65635482 ~ 65636372 (-) |
| si:ch211-117c9.5 | LOC106566567 | other | downstream | 1206145 | 64445355 ~ 64485638 (-) |
| G1400578 | NA | other | downstream | 1344161 | 64309883 ~ 64310456 (-) |
| G1400565 | LOC106575828 | other | downstream | 1368624 | 64285628 ~ 64285993 (-) |
| G1400564 | LOC106597321 | other | downstream | 1370070 | 64284207 ~ 64284547 (-) |
| G1402686 | srpk3 | other | upstream | 770696 | 66425551 ~ 66426322 (-) |
| G1402707 | LOC106566505 | other | upstream | 830046 | 66484901 ~ 66494667 (-) |
| G1403498 | NA | other | upstream | 1788566 | 67443421 ~ 67444179 (-) |
| LOC118939478 | LOC106566484 | other | upstream | 3136334 | 68791189 ~ 68795025 (-) |
