G1401632



Basic Information


Item Value
gene id G1401632
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 65705747 ~ 65705961 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1600654
GGTAGGCAGCATGATCAGGATAtgtatgcaacaaaagttcaacattcaccttctgcttcCATTTCTGTCAAGCCTCTTTGCATAATTCCAATGTATGAACCACATAGAACGCAATGCAAAGCGATTCAGCAAGGCAAAcggtcagccagctggttctggggctctgttgacaaacacaaacagaccccaaggacagcaacacaattacaaCCAAC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1600654 True 215 lncRNA 0.45 1 65705747 65705961

Neighbor


gene id symbol gene type direction distance location
cttnbp2nlb cttnbp2nl coding downstream 969 65660280 ~ 65704778 (-)
apeh apeh coding downstream 61606 65633130 ~ 65644141 (-)
tlr9 tlr9 coding downstream 77254 65623175 ~ 65628493 (-)
LOC110518541 LOC106566519 coding downstream 85455 65131650 ~ 65620292 (-)
wnt5a LOC106566524 coding downstream 575980 65094789 ~ 65129767 (-)
LOC110492562 LOC106568106 coding upstream 9750 65715711 ~ 65754610 (-)
ddx20 ddx20 coding upstream 563676 66269637 ~ 66276483 (-)
LOC110492566 LOC106566511 coding upstream 574995 66280956 ~ 66296439 (-)
b4galt3 b4galt3 coding upstream 597628 66303589 ~ 66308067 (-)
bgnb bgn coding upstream 614461 66320422 ~ 66345643 (-)
G1401378 NA non-coding downstream 50892 65654617 ~ 65654855 (-)
G1401376 capza1 non-coding downstream 51813 65648396 ~ 65653934 (-)
G1401611 NA non-coding downstream 88502 65616811 ~ 65617245 (-)
G1401606 NA non-coding downstream 100855 65604227 ~ 65604892 (-)
G1401596 NA non-coding downstream 128848 65576408 ~ 65576899 (-)
G1401383 NA non-coding upstream 2664 65708625 ~ 65709149 (-)
G1401667 NA non-coding upstream 139376 65845337 ~ 65847509 (-)
G1401692 NA non-coding upstream 177265 65883226 ~ 65883433 (-)
G1401702 NA non-coding upstream 197598 65903559 ~ 65903883 (-)
G1401617 NA other downstream 69375 65635482 ~ 65636372 (-)
si:ch211-117c9.5 LOC106566567 other downstream 1257275 64445355 ~ 64485638 (-)
G1400578 NA other downstream 1395291 64309883 ~ 64310456 (-)
G1400565 LOC106575828 other downstream 1419754 64285628 ~ 64285993 (-)
G1400564 LOC106597321 other downstream 1421200 64284207 ~ 64284547 (-)
G1402686 srpk3 other upstream 719590 66425551 ~ 66426322 (-)
G1402707 LOC106566505 other upstream 778940 66484901 ~ 66494667 (-)
G1403498 NA other upstream 1737460 67443421 ~ 67444179 (-)
LOC118939478 LOC106566484 other upstream 3085228 68791189 ~ 68795025 (-)

Expression



Co-expression Network