G1401692



Basic Information


Item Value
gene id G1401692
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 65883226 ~ 65883433 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1600719
tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatttccattAACAGGTAGATGAGTGAAGTGCCGTGGGACGAGAGTTCTTCACGTTGTTATCTCTGTTATCCTATCTTTCATTCACTGCTCTAAATTGGCATGGCTTTGCTATTGGGAACAAACTATCAACCTATTCGTCGTCTCCAGAGATGGCAAGAGGCATAGAGGGCAACTGCT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1600719 True 208 lncRNA 0.45 1 65883226 65883433

Neighbor


gene id symbol gene type direction distance location
LOC110492562 LOC106568106 coding downstream 142450 65715711 ~ 65754610 (-)
cttnbp2nlb cttnbp2nl coding downstream 178448 65660280 ~ 65704778 (-)
apeh apeh coding downstream 239085 65633130 ~ 65644141 (-)
tlr9 tlr9 coding downstream 254733 65623175 ~ 65628493 (-)
LOC110518541 LOC106566519 coding downstream 262934 65131650 ~ 65620292 (-)
ddx20 ddx20 coding upstream 386204 66269637 ~ 66276483 (-)
LOC110492566 LOC106566511 coding upstream 397523 66280956 ~ 66296439 (-)
b4galt3 b4galt3 coding upstream 420156 66303589 ~ 66308067 (-)
bgnb bgn coding upstream 436989 66320422 ~ 66345643 (-)
si:dkey-32e6.6 LOC106566508 coding upstream 498570 66382003 ~ 66421064 (-)
G1401667 NA non-coding downstream 35717 65845337 ~ 65847509 (-)
G1401383 NA non-coding downstream 174077 65708625 ~ 65709149 (-)
G1401632 NA non-coding downstream 177265 65705747 ~ 65705961 (-)
G1401378 NA non-coding downstream 228371 65654617 ~ 65654855 (-)
G1401702 NA non-coding upstream 20126 65903559 ~ 65903883 (-)
G1401717 NA non-coding upstream 49465 65932898 ~ 65933267 (-)
G1402442 NA non-coding upstream 86132 65969565 ~ 65969914 (-)
G1402485 NA non-coding upstream 151906 66035339 ~ 66035884 (-)
G1402492 NA non-coding upstream 161591 66045024 ~ 66045400 (-)
G1401617 NA other downstream 246854 65635482 ~ 65636372 (-)
si:ch211-117c9.5 LOC106566567 other downstream 1434754 64445355 ~ 64485638 (-)
G1400578 NA other downstream 1572770 64309883 ~ 64310456 (-)
G1400565 LOC106575828 other downstream 1597233 64285628 ~ 64285993 (-)
G1402686 srpk3 other upstream 542118 66425551 ~ 66426322 (-)
G1402707 LOC106566505 other upstream 601468 66484901 ~ 66494667 (-)
G1403498 NA other upstream 1559988 67443421 ~ 67444179 (-)
LOC118939478 LOC106566484 other upstream 2907756 68791189 ~ 68795025 (-)
G1404974 LOC106566438 other upstream 3319853 69203286 ~ 69207158 (-)

Expression



Co-expression Network