G1401702



Basic Information


Item Value
gene id G1401702
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 65903559 ~ 65903883 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1600729
atatatgactgattgttgtcctatggacagagtctcccacctcagctgtagatctctgcagttcatccagagtgatcatgggcctcttggctgcatctctgatcagtcttctccttgtatgagctgaaagtttagagggacgaccaggtcttggtagatttgcagtggtctgatactccttccatttcaatattatcgcttgcacagtgctccttgggatgtttaaagcttgggaaatctttttgtatccaaatccgtctttaaacttcttcacaacagtatctcggacctgcctggtgtgttcttcttgttcttcatgattctc

Function


NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA


RNA id representative length rna type GC content exon number start site end site
TU1600729 True 325 lncRNA 0.44 1 65903559 65903883

Neighbor


gene id symbol gene type direction distance location
LOC110492562 LOC106568106 coding downstream 162783 65715711 ~ 65754610 (-)
cttnbp2nlb cttnbp2nl coding downstream 198781 65660280 ~ 65704778 (-)
apeh apeh coding downstream 259418 65633130 ~ 65644141 (-)
tlr9 tlr9 coding downstream 275066 65623175 ~ 65628493 (-)
LOC110518541 LOC106566519 coding downstream 283267 65131650 ~ 65620292 (-)
ddx20 ddx20 coding upstream 365754 66269637 ~ 66276483 (-)
LOC110492566 LOC106566511 coding upstream 377073 66280956 ~ 66296439 (-)
b4galt3 b4galt3 coding upstream 399706 66303589 ~ 66308067 (-)
bgnb bgn coding upstream 416539 66320422 ~ 66345643 (-)
si:dkey-32e6.6 LOC106566508 coding upstream 478120 66382003 ~ 66421064 (-)
G1401692 NA non-coding downstream 20126 65883226 ~ 65883433 (-)
G1401667 NA non-coding downstream 56050 65845337 ~ 65847509 (-)
G1401383 NA non-coding downstream 194410 65708625 ~ 65709149 (-)
G1401632 NA non-coding downstream 197598 65705747 ~ 65705961 (-)
G1401717 NA non-coding upstream 29015 65932898 ~ 65933267 (-)
G1402442 NA non-coding upstream 65682 65969565 ~ 65969914 (-)
G1402485 NA non-coding upstream 131456 66035339 ~ 66035884 (-)
G1402492 NA non-coding upstream 141141 66045024 ~ 66045400 (-)
G1402550 NA non-coding upstream 244754 66148637 ~ 66148974 (-)
G1401617 NA other downstream 267187 65635482 ~ 65636372 (-)
si:ch211-117c9.5 LOC106566567 other downstream 1455087 64445355 ~ 64485638 (-)
G1400578 NA other downstream 1593103 64309883 ~ 64310456 (-)
G1400565 LOC106575828 other downstream 1617566 64285628 ~ 64285993 (-)
G1402686 srpk3 other upstream 521668 66425551 ~ 66426322 (-)
G1402707 LOC106566505 other upstream 581018 66484901 ~ 66494667 (-)
G1403498 NA other upstream 1539538 67443421 ~ 67444179 (-)
LOC118939478 LOC106566484 other upstream 2887306 68791189 ~ 68795025 (-)
G1404974 LOC106566438 other upstream 3299403 69203286 ~ 69207158 (-)

Expression



Co-expression Network