Gene
RNA
| Item | Value |
|---|---|
| gene id | G1402485 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 66035339 ~ 66035884 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| proline-rich extensin-like protein EPR1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1601668 | True | 414 | lncRNA | 0.38 | 2 | 66035339 | 66035884 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492562 | LOC106568106 | coding | downstream | 294563 | 65715711 ~ 65754610 (-) |
| cttnbp2nlb | cttnbp2nl | coding | downstream | 330561 | 65660280 ~ 65704778 (-) |
| apeh | apeh | coding | downstream | 391198 | 65633130 ~ 65644141 (-) |
| tlr9 | tlr9 | coding | downstream | 406846 | 65623175 ~ 65628493 (-) |
| LOC110518541 | LOC106566519 | coding | downstream | 415047 | 65131650 ~ 65620292 (-) |
| ddx20 | ddx20 | coding | upstream | 233753 | 66269637 ~ 66276483 (-) |
| LOC110492566 | LOC106566511 | coding | upstream | 245072 | 66280956 ~ 66296439 (-) |
| b4galt3 | b4galt3 | coding | upstream | 267705 | 66303589 ~ 66308067 (-) |
| bgnb | bgn | coding | upstream | 284538 | 66320422 ~ 66345643 (-) |
| si:dkey-32e6.6 | LOC106566508 | coding | upstream | 346119 | 66382003 ~ 66421064 (-) |
| G1402442 | NA | non-coding | downstream | 65425 | 65969565 ~ 65969914 (-) |
| G1401717 | NA | non-coding | downstream | 102072 | 65932898 ~ 65933267 (-) |
| G1401702 | NA | non-coding | downstream | 131456 | 65903559 ~ 65903883 (-) |
| G1401692 | NA | non-coding | downstream | 151906 | 65883226 ~ 65883433 (-) |
| G1401667 | NA | non-coding | downstream | 187830 | 65845337 ~ 65847509 (-) |
| G1402492 | NA | non-coding | upstream | 9140 | 66045024 ~ 66045400 (-) |
| G1402550 | NA | non-coding | upstream | 112753 | 66148637 ~ 66148974 (-) |
| G1402585 | NA | non-coding | upstream | 165275 | 66201159 ~ 66201503 (-) |
| G1402588 | NA | non-coding | upstream | 169744 | 66205628 ~ 66206240 (-) |
| G1402604 | NA | non-coding | upstream | 198369 | 66234253 ~ 66317716 (-) |
| G1401617 | NA | other | downstream | 398967 | 65635482 ~ 65636372 (-) |
| si:ch211-117c9.5 | LOC106566567 | other | downstream | 1586867 | 64445355 ~ 64485638 (-) |
| G1400578 | NA | other | downstream | 1724883 | 64309883 ~ 64310456 (-) |
| G1400565 | LOC106575828 | other | downstream | 1749346 | 64285628 ~ 64285993 (-) |
| G1402686 | srpk3 | other | upstream | 389667 | 66425551 ~ 66426322 (-) |
| G1402707 | LOC106566505 | other | upstream | 449017 | 66484901 ~ 66494667 (-) |
| G1403498 | NA | other | upstream | 1407537 | 67443421 ~ 67444179 (-) |
| LOC118939478 | LOC106566484 | other | upstream | 2755305 | 68791189 ~ 68795025 (-) |
| G1404974 | LOC106566438 | other | upstream | 3167402 | 69203286 ~ 69207158 (-) |
